List of probes and primers

2970 probes found.

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Probe name Full name (Alm et al.) Category Target rRNA Specificity FISH Primer
cWTF915 higher taxonomic levels 16S AMD nanoarchaeal lineage
Azo644 (AZA645) S-*-Aza-0645-a-A-18 dinitrogen-fixing bacteria 16S Most members of the Azoarcus cluster
A08KA458 S-*-A08KA-0459-a-A-18 - 16S Oral strain A08KA lineage
BuCc symbiotic microbes 16S Buchnera aphidicola Cc
SCc symbiotic microbes 16S S-Symbiont R-Type
WCc symbiotic microbes 16S Wolbachia
Apur453 S-S-Lpcpur-0453-a-A-26 phototrophic bacteria 16S Lamprocystis purpurea (DSM4197), strain A12 3 and clone 345, Lake Cadagno.
Cmok453 S-S-Chrok-0453-a-A-26 phototrophic bacteria 16S Chromatium okenii (DSM169) and clone 359, Lake Cadagno.
Laro453 S-S-Lpcro-0453-a-A-26 phototrophic bacteria 16S Lamprocystis roseopersicina (DSM229) and clone 136, Lake Cadagno
S453D S-*-Lpc-0453-a-A-26 phototrophic bacteria 16S Lamprocystis-related bacteria (strain D21 and clone 261, Lake Cadagno)
Cmvi453 S-S-Alcvi-0453-a-A-26 phototrophic bacteria 16S Allochromatium vinosum (DSM180)
S453F S-*-Lpc-0453-b-A-26 phototrophic bacteria 16S Lamprocystis - related bacteria (clones 335, 371 and strain cad16, Lake Cadagno)
DSC213 S-S-Dscthz-0213-a-A-18 sulfate-reducing microbes 16S Desulfocapsa thiozymogenes
DSC441 S-*-Dsc-0441-a-A-19 sulfate-reducing microbes 16S Few Desulfocapsa
S453H S-*-Tcs-0453-a-A-26 phototrophic bacteria 16S Thiocystis minor-related bacteria (clones 222, 13 and strain H1.1, Lake Cadagno)
S448 S-*-Tcs-0448-a-A-21 phototrophic bacteria 16S Thiocystis gelatinosa-related bacteria (clone 130 and strain 448.10, Lake Cadagno)
SRB441 sulfate-reducing microbes 16S Few Desulfobulbaceae
DsmA455 S-*-Dmn-0455-a-A-26 sulfate-reducing microbes 16S Desulfomonile-related Lake Cadagno clones 618, 624, 626, and 651
DsmB455 S-*-Dmn-0455-b-A-26 sulfate-reducing microbes 16S Desulfomonile-related Lake Cadagno clone 650
Chlp441 S-S-Chlphb-0441-a-A-23 phototrophic bacteria 16S Chlorobium phaeobacteroides (DSM 266), strain 1VIID7 and clone 366 Lake Cadagno.
Chlc190 S-S-Chlctf-0190-a-A-22 phototrophic bacteria 16S Chlorobium clathratiforme (DSM 5477), strain 4DE and clones 810, 827, 849 Lake Cadagno.
UV7-763 S-St-UV7-763-a-A-18 symbiotic microbes 16S Parachlamydia sp. UV-7
TG1-Ta-Rsa S-S-E.tri-1023-a-A-20 symbiotic microbes 16S Candidatus Endomicrobium trichonymphae
TG1-Pv-Rsa S-S-E.pyr-1023-a-A-20 symbiotic microbes 16S Candidatus Endomicrobium pyrsonymphae
Arglo32 S-O-Arglo-0032-a-A-20 extremophilic microbes 16S Archaeoglobales