List of probes and primers

2970 probes found.

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Probe name Full name (Alm et al.) Category Target rRNA Specificity FISH Primer
Lzeae — - 16S Lactobacillus zeae, Lactobacillus casei ✔ ✘
Ooeni — - 16S Oenococcus oeni ✔ ✘
Pdamn — - 16S Pediococcus damnosus ✔ ✘
Pparv — - 16S Pediococcus parvulus ✔ ✘
Urobe63a S-*-Urobe-0063-a-A-20 bacteria of medical or hygienical relevance 16S uncultured Ruminococcus obeum-like bacteria ✔ ✘
Urobe63b S-*-Urobe-0063-b-A-20 bacteria of medical or hygienical relevance 16S uncultured Ruminococcus obeum-like bacteria ✔ ✘
CFX1238 — extremophilic microbes, phototrophic bacteria 16S Chloroflexus ✔ ✘
RFX1238 — extremophilic microbes, phototrophic bacteria 16S Roseiflexus assemblage ✔ ✘
Pchl454 — - 16S Pseudomonas chlororaphis ✔ ✘
b91 — symbiotic microbes 16S mealybug betaproteobacterial endosymbionts ✔ ✘
b162 — symbiotic microbes 16S mealybug betaproteobacterial endosymbionts ✔ ✘
b886 — symbiotic microbes 16S mealybug betaproteobacterial endosymbionts ✔ ✘
b1273 — symbiotic microbes 16S mealybug betaproteobacterial endosymbionts ✔ ✘
g80 — symbiotic microbes 16S secondary endosymbiont of Planococcus citri ✔ ✘
g458 — symbiotic microbes 16S secondary endosymbiont of Planococcus citri ✔ ✘
g630 — symbiotic microbes 16S secondary endosymbiont of Planococcus citri ✔ ✘
g1273 — symbiotic microbes 16S secondary endosymbiont of Planococcus citri ✔ ✘
NLIMI 91 S-G-N.limI-0091-a-A-18 bacteria of relevance in wastewater treatment 16S Nostocoida limicola I ✔ ✘
NLIMII 175 S-S-N.limII-0175-a-A-18 bacteria of relevance in wastewater treatment 16S Nostocoida limicola II strains except strain Ben 70 ✔ ✘
NLIMII 192 S-S-N.limII-0192-a-A-18 bacteria of relevance in wastewater treatment 16S Nostocoida limicola II strain Ben 70 ✔ ✘
NLIMIII 301 S-S-N.limIII-0301-a-A-18 bacteria of relevance in wastewater treatment 16S Nostocoida limicola III strains ✔ ✘
NLIMIII 729 S-S-N.limIII-0729-a-A-18 bacteria of relevance in wastewater treatment 16S Nostocoida limicola III strain Ben 220 ✔ ✘
NLIMIII 830 S-S-N.limIII-0830-a-A-18 bacteria of relevance in wastewater treatment 16S Nostocoida limicola III strains except Ben 220 ✔ ✘
Bmy843 S-*-Bmy-0843-a-A-18 bacteria of medical or hygienical relevance 16S Bacillus ✔ ✘
Ver620 S-*-Ver-0620-a-A-18 bacteria of medical or hygienical relevance 16S Verrucomicrobium ✔ ✘