List of probes and primers

2970 probes found.

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Probe name Full name (Alm et al.) Category Target rRNA Specificity FISH Primer
SymA eukaryotes 18S Symbiodinium clade A
SymB eukaryotes 18S Symbiodinium clade B
SymC eukaryotes 18S Symbiodinium clade C
Myc657 S-*-Myc-0657-a-A-16 bacteria of relevance in wastewater treatment 16S Mycobacterium subdivision (mycolic acid-containing actinomycetes)
Hpy16S bacteria of medical or hygienical relevance 16S Helicobacter pylori
COR653 S-*-Cor-0653-a-A-18 animal and human associated microbiota, intestinal microbiota 16S Coriobacterium group (Coriobacterium and Collinsella)
ATO291 S-*-Ato-0291-a-A-17 animal and human associated microbiota, intestinal microbiota 16S Atopobium cluster
Ntcoc206 S-*-Ntcoc-206-a-A-18 nitrite-oxidizing bacteria, bacteria of relevance in wastewater treatment 16S Nitrococcus mobilis
Ntspn994 S-*-Ntspn-994-a-A-18 nitrite-oxidizing bacteria, bacteria of relevance in wastewater treatment 16S Nitrospina gracilis
Nscry1004 S-*-Nscry-1004-a-A-19 ammonia-oxidizing bacteria, bacteria of relevance in wastewater treatment 16S Nitrosomonas cryotolerans
Nscoc65 S-*-Nscoc-65-a-A-18 ammonia-oxidizing bacteria, bacteria of relevance in wastewater treatment 16S Nitrosococcus oceani, Nitrosococcus halophilus
Nscoc1248 S-*-Nscoc-1248-a-A-18 ammonia-oxidizing bacteria, bacteria of relevance in wastewater treatment 16S Nitrosococcus oceani, Nitrosococcus halophilus
Dhe1259t - 16S some Dehalococcoides spp.
Dhe1259c - 16S some Dehalococcoides spp.
Sca1309 S-G-Sca-1309-a-A-21 bacteria of relevance in wastewater treatment, anaerobic ammonium-oxidizing bacteria 16S genus Candidatus Scalindua
Scabr1114 S-*-Scabr-1114-a-A-22 bacteria of relevance in wastewater treatment, anaerobic ammonium-oxidizing bacteria 16S Candidatus Scalidua brodae
Amx368 S-*-Amx-0368-a-A-18 bacteria of relevance in wastewater treatment, anaerobic ammonium-oxidizing bacteria 16S all ANAMMOX bacteria
BS820 S-*-BS-820-a-A-22 bacteria of relevance in wastewater treatment, anaerobic ammonium-oxidizing bacteria 16S Candidatus Scalidua wagneri, Candidatus Scalidua sorokinii
NSMR76 bacteria of relevance in wastewater treatment, ammonia-oxidizing bacteria 16S Nitrosomonas marina-like ammonia-oxidizing bacteria
NSMR34 bacteria of relevance in wastewater treatment, ammonia-oxidizing bacteria 16S Nitrosospira tenius-like ammonia-oxidizing bacteria
Nmo218 bacteria of relevance in wastewater treatment, ammonia-oxidizing bacteria 16S Nitrosomonas oligotropha-lineage
NITROSO4E bacteria of relevance in wastewater treatment, ammonia-oxidizing bacteria 16S Betaproteobacterial ammonia-oxidizing bacteria
Bfra602 S-*-Bfra-0602-a-A-19 bacteria of medical or hygienical relevance 16S Bacteroides fragilis group
Bdis656 S-*-Bdis-0656-a-A-18 bacteria of medical or hygienical relevance 16S Bacteroides distasonis
Clit135 S-*-Clit-0135-a-A-19 - 16S some of the Clostridium lituseburense group (Clostridium cluster XI)