List of probes and primers

2970 probes found.

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Probe name Full name (Alm et al.) Category Target rRNA Specificity FISH Primer
STEBA635 S-*-Steba-0635-a-A-18 bacteria of relevance in wastewater treatment 16S Few members of the Sterolibacterium lineage (activated sludge clones S28 and A13)
STEBA643 S-*-Steba-0643-a-A-18 bacteria of relevance in wastewater treatment 16S Few members of the Sterolibacterium lineage (activated sludge clones S40, H12, H23, and H20)
STEBA214 S-*-Steba-0214-a-A-18 bacteria of relevance in wastewater treatment 16S Few members of the Sterolibacterium lineage (clones SBR1001, SBR2080, and GC24)
QUACO135 S-*-Quaco-0135-a-A-18 bacteria of relevance in wastewater treatment 16S Quadricoccus australiensis, reactor clone PHOS-HE23
BTWO663 S-*-Btwo-0663-a-A-18 bacteria of relevance in wastewater treatment 16S most Rhodocyclales, but not the Rhodocyclales environmental cluster 1, Zoogloea spp., and Dechlorosoma-Azospira cluster
ATD1459 S-*-ATD-1459-a-A-18 dinitrogen-fixing bacteria 16S most Azoarcus spp. and Thauera spp., Denitromonas sp.
TH3 (AZTHA222,RHC222) S-*-RHC-0222-a-A-18 bacteria of relevance in wastewater treatment, dinitrogen-fixing bacteria 16S Some members of the Azoarcus-Thauera-Denitromonas, Zoogloea, and Azovibrio lineages
AZIN1023 S-*-Az.in-1023-a-A-18 dinitrogen-fixing bacteria 16S Azoarcus sp. BH72, Azoarcus indigens
TH14 (RHC175b) S-*-RHC-0175-b-A-18 bacteria of relevance in wastewater treatment, dinitrogen-fixing bacteria 16S Some Thauera, Azoarcus, Zoogloea, Sterolibacterium, and Azovibrio spp.
AZA1252 S-*-Aza-1252-a-A-18 dinitrogen-fixing bacteria 16S Azoarcus evansii, Azoarcus toluvorans, Azoarcus tolulyticus, Azoarcus toluclasticus
ATDe467 S-*-ATDe-0467-a-A-18 bacteria of relevance in wastewater treatment 16S Activated sludge clones A33, H25, H30, H35, S3, S10, and S23 of the Azoarcus-Thauera-Denitromonas lineage
ZOGLO1416 S-G-Zoglo-1416-a-A-18 bacteria of relevance in wastewater treatment 16S Zoogloea spp.
ACCBA651 S-*-Accba-0651-a-A-18 bacteria of relevance in wastewater treatment 16S most bacteria of the Candidatus Accumulibacter phosphatis cluster
ACCBA455 S-*-Accba-0455-a-A-18 bacteria of relevance in wastewater treatment 16S Some members of the Candidatus Accumulibacter cluster
ACCBA846 S-*-Accba-846-a-A-18 bacteria of relevance in wastewater treatment 16S Most members of the Candidatus Accumulibacter cluster
STEBA448 S-*-Steba-0448-a-A-18 bacteria of relevance in wastewater treatment 16S Some members of the Sterolibacterium lineage (activated sludge clones S28, A13, S40, H12, H23, and H20)
Cap1428 symbiotic microbes 16S Candidatus capitivii acidiprotistae
EUKb1193 eukaryotes 18S nearly all Eukarya
EUKb503 eukaryotes 18S nearly all Eukarya
EUKb310 eukaryotes 18S nearly all Eukarya
LKC59 S-*-eProt-0059-a-A-18 - 16S Epsilonproteobacterial group I from Lower Kane Cave
LKC1006 S-*-eProt-1006-a-A-18 - 16S Epsilonproteobacterial group II from Lower Kane Cave
HHY bacteria of relevance in wastewater treatment 16S Haliscomenobacter hydrossis
TNI bacteria of relevance in wastewater treatment 16S Thiothrix nivea
LMU bacteria of relevance in wastewater treatment 16S Leucothrix mucor