List of probes and primers

2970 probes found.

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Probe name Full name (Alm et al.) Category Target rRNA Specificity FISH Primer
THAU443 S-*-Thau-0443-a-A-18 - 16S Thauera selenatis, Thauera phenylacetica, and related Thauera spp. ✘ ✘
THAU580 S-*-Thau-0580-a-A-18 - 16S Thauera selenatis, soil clone AX39 ✘ ✘
THAU455b S-*-Thau-0455-b-A-18 - 16S Thauera sp. PIV-1, TCB-transforming microbial consortium clone SJA-186 ✘ ✘
THAU468 S-*-Thau-0468-a-A-18 - 16S Thauera sp. PIV-1, TCB-transforming microbial consortium clone SJA-186 ✘ ✘
THATE461 S-*-Tha.te-0461-a-A-18 - 16S Thauera terpenica ✘ ✘
DENAR176 S-*-Denar-0176-a-A-18 denitrifying (nitrate-reducing) bacteria 16S Denitromonas aromaticus ✘ ✘
DENAR453 S-*-Denar-0453-a-A-18 denitrifying (nitrate-reducing) bacteria 16S Denitromonas aromaticus ✘ ✘
DENAR845 S-*-Denar-0845-a-A-18 denitrifying (nitrate-reducing) bacteria 16S Denitromonas aromaticus ✘ ✘
ZOGLO828 S-*-Zoglo-0828-a-A-18 bacteria of relevance in wastewater treatment 16S Zoogloea spp. ✘ ✘
ZOGLO455 S-*-Zoglo-0455-a-A-18 bacteria of relevance in wastewater treatment 16S Some members of the Zoogloea lineage (activated sludge clones H13, H11, H22, H10, H40, H27, and S21), not Z. ramigera and Z. resiniphila ✘ ✘
ZORAM211 S-*-Zo.ram-0211-a-A-18 bacteria of relevance in wastewater treatment 16S Zoogloea ramigera ✘ ✘
ZORAM441 S-*-Zo.ram-0441-a-A-18 bacteria of relevance in wastewater treatment 16S Zoogloea ramigera ✘ ✘
RHAC855 S-*-RhAc-0855-a-A-18 bacteria of relevance in wastewater treatment, phototrophic bacteria 16S Rhodocyclus spp., most members of the Candidatus Accumulibacter cluster ✘ ✘
ACCBA443 S-*-Accba-0443-a-A-18 bacteria of relevance in wastewater treatment 16S Some members of the Candidatus Accumulibacter cluster ✘ ✘
RHO828 S-G-Rho-0828-a-A-18 phototrophic bacteria 16S Rhodocyclus spp. ✘ ✘
RHO842 S-G-Rho-0842-a-A- phototrophic bacteria 16S Rhodocyclus spp. ✘ ✘
RHOTE1280 S-*-Rho.te-1280-a-A-18 phototrophic bacteria 16S Rhodocyclus tenuis DSM109, Rhodocyclus tenuis SW18 ✘ ✘
AZP737 S-G-Azp-0737-a-A-18 dinitrogen-fixing bacteria 16S Most Azospira spp. ✘ ✘
AZP471 S-G-Azp-0471-a-A-18 dinitrogen-fixing bacteria 16S Most Azospira spp. ✘ ✘
AZP456 S-G-Azp-0456-a-A-18 dinitrogen-fixing bacteria 16S Most Azospira spp. ✘ ✘
DCMAG455 S-S-Dcm.ag-0455-a-A-18 - 16S Dechloromonas agitata ✘ ✘
DEMFE455 S-*-Dem.Fe-0455-a-A-18 - 16S Ferribacterium limneticum, few Dechloromonas spp. ✘ ✘
AZV211 S-G-Azv-0211-a-A-18 dinitrogen-fixing bacteria 16S Azovibrio spp. ✘ ✘
AZVRE847 S-*-Azv.re-0847-a-A-18 dinitrogen-fixing bacteria 16S Azovibrio restrictus ✘ ✘
STEBA468 S-*-Steba-0468-a-A-18 bacteria of relevance in wastewater treatment 16S Some members of the Sterolibacterium lineage (activated sludge clones S28, A13, S40, H12, H23, and H20) ✘ ✘