List of probes and primers

2970 probes found.

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Probe name Full name (Alm et al.) Category Target rRNA Specificity FISH Primer
Rum17903_443 S-*-Ruco-0443-a-A-20 animal and human associated microbiota, intestinal microbiota 16S unclassified Ruminococcaceae OTU ✔ ✘
LasA5944_580 S-*-LspA-0580-a-A-24 animal and human associated microbiota, intestinal microbiota 16S subgroup A of unclassified Lachnospiraceae OTU ✔ ✘
LasB5944_580 S-*-LspB-0580-a-A-24 animal and human associated microbiota, intestinal microbiota 16S subgroup B of unclassified Lachnospiraceae OTU ✔ ✘
Lab9057_570 S-S-Lbad-0570-a-A-23 animal and human associated microbiota, intestinal microbiota 16S Lactobacillus taiwanensis - L. johnsonii - L. gasseri group ✔ ✘
Lab2185_87 S-*-Lbre-0087-a-A-24 animal and human associated microbiota, intestinal microbiota 16S Lactobacillus reuteri ✔ ✘
UCB-823 — - 16S Plasticicumulans acidivorans ✔ ✘
ULB-450 — - 16S Plasticicumulans lactivorans ✔ ✘
UCB-127 — - 16S Plasticicumulans acidivorans ✔ ✘
L.mars_symb1 — - 16S Endosymbiont type A of Lamellibrachia anaximandri (Marsili seamount) ✔ ✘
L.mars_symb2 — - 16S Endosymbiont type B of Lamellibrachia anaximandri (Marsili seamount) ✔ ✘
volv-835 — - 16S Rickettsial endosymbionts hosted by Carteria, Pleodorina, Volvox (green algae) and Diophrys appendiculata (ciliate) ✔ ✘
help-volv1 — - 16S Rickettsiaceae ✘ ✘
help-volv2 — - 16S Rickettsial endosymbionts of Carteria, Pleodorina, Volvox (green algae) and Diophrys appendiculata (ciliate) ✘ ✘
SUP1430R S-G-SUP-1430-a-A-18 - 16S Genus Superbacter ✘ ✘
SUP510F S-G-SUP-0510-a-S-17 - 16S Genus Superbacter ✘ ✘
SUP666 L-G-SUP-0666-a-A-16 - 23S Genus Superbacter ✘ ✘
MEVE845 S-G-MEVE-0845-a-A-21 methylotrophic bacteria, drinking water microbiota 16S genus Methyloversatilis ✘ ✘
PDD8_644 — symbiotic microbes 16S Candidatus Cochliophilus cryoturris, symbiont of Cochliopodium minus ✔ ✘
ZMS152 — - 16S Zoothamnium mariella ectosymbiont ✘ ✘
ZMS1239 — - 16S Zoothamnium mariella ectosymbiont ✘ ✘