List of probes and primers

2970 probes found.

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Probe name Full name (Alm et al.) Category Target rRNA Specificity FISH Primer
Elo1-1250 S-S-Elo1-1250-a-A-18 - 16S Tetrasphaera elongata and related clones ✔ ✘
Tet1-823 S-S-Tet1-823-a-A-18 - 16S Tetrasphaera elongata-related clones ✔ ✘
Tet1-266 S-S-Tet1-266-a-A-18 - 16S Tetrasphaera Clone ASM31 ✔ ✘
Tet2-842 S-S-Tet2-842-a-A-18 - 16S Clones related to Tetrasphaera jenkinsii, Tetrasphaera australiensis, and Tetrasphaera veronensis ✔ ✘
Tet2-831 S-S-Tet2-831-a-A-18 - 16S Tetrasphaera australiensis, Tetrasphaera veronensis, and uncultured Tetrasphaera ✔ ✘
Tet2-892 S-S-Tet2-892-a-A-18 - 16S Tetrasphaera Clone ASM47 ✔ ✘
Tet2-87 S-S-Tet2-87-a-A-18 - 16S Uncultured Tetrasphaera ✔ ✘
Tet2-174 S-S-Tet2-174-a-A-18 - 16S Tetrasphaera jenkinsii, Tetrasphaera australiensis, Tetrasphaera veronensis, and Candidatus Nostocoida limicola ✔ ✘
Tet3-654 S-S-Tet3-654-a-A-18 - 16S 3 Uncultured Tetrasphaera ✔ ✘
Tet3-19 S-S-Tet3-19-a-A-18 - 16S Tetrasphaera Clone ASM57 ✔ ✘
Str56 S-S-Str-56-a-A-18 - 16S Streptococcus spp. ✔ ✘
Lac93 S-S-Lac-93-a-A-18 - 16S Lactococcus spp. ✔ ✘
Pro60 S-S-Pro-60-a-A-18 - 16S Propionicimonas spp. ✔ ✘
LasA3720_1281 S-*-LspA-1281-a-A-23 animal and human associated microbiota, intestinal microbiota 16S subgroup A of unclassified Lachnospiraceae OTU ✔ ✘
LasB3720_1281 S-*-LspB-1281-a-A-23 animal and human associated microbiota, intestinal microbiota 16S subgroup B of unclassified Lachnospiraceae OTU ✔ ✘
Bac16065_472 S-*-Bada-0472-a-A-24 animal and human associated microbiota, intestinal microbiota 16S unclassified Bacteroidales cluster S24-7 OTU ✔ ✘
Bac3732_846 S-*-Bada-0846-a-A-24 animal and human associated microbiota, intestinal microbiota 16S unclassified Bacteroidales cluster S24-7 OTU ✔ ✘
Bac11839_649 S-*-Bada-0649-a-A-23 animal and human associated microbiota, intestinal microbiota 16S unclassified Bacteroidales cluster S24-7 OTU ✔ ✘
Bac15326_476 S-*-Bada-0476-a-A-23 animal and human associated microbiota, intestinal microbiota 16S unclassified Bacteroidales cluster S24-7 OTU ✔ ✘
Bac13481_437 S-*-Bada-0437-a-A-22 animal and human associated microbiota, intestinal microbiota 16S unclassified Bacteroidales cluster S24-7 OTU ✔ ✘
All3256_484 S-*-Allb-0484-a-A-22 animal and human associated microbiota, intestinal microbiota 16S subgroup of genus Allobaculum ✔ ✘
Baci731A_87 S-*-Baci-0087-a-A-24 animal and human associated microbiota, intestinal microbiota 16S Bacteroides acidifaciens Group-2 ✔ ✘
Baci731B_87 S-*-Baci-0087-a-A-22 animal and human associated microbiota, intestinal microbiota 16S Bacteroides acidifaciens Group-1 ✔ ✘
Rum14644A_184 S-*-Ruco-0184-a-A-23 animal and human associated microbiota, intestinal microbiota 16S unclassified Oscillibacter OTU ✔ ✘
Rum14644B_64 S-*-Ruco-0064-a-A-24 animal and human associated microbiota, intestinal microbiota 16S unclassified Oscillibacter OTU ✔ ✘