List of probes and primers

2970 probes found.

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Probe name Full name (Alm et al.) Category Target rRNA Specificity FISH Primer
21N bacteria of relevance in wastewater treatment 16S Eikelboom type 021N strain II-26
LDI bacteria of relevance in wastewater treatment 16S Leptothrix discophora
SNA bacteria of relevance in wastewater treatment 16S Sphaerotilus natans
Cp1 bacteria of medical or hygienical relevance 16S Clostridium perfringens
Cp2 bacteria of medical or hygienical relevance 16S Clostridium perfringens
Cp3 bacteria of medical or hygienical relevance 23S Clostridium perfringens
ARBA (23-mer) bacteria of medical or hygienical relevance 16S Arcobacter spp.
ARBA (27-mer) bacteria of medical or hygienical relevance 16S Arcobacter spp.
ARBU (24-mer) bacteria of medical or hygienical relevance 16S Arcobacter butzleri
Hp16S-1 bacteria of medical or hygienical relevance 16S Helicobacter pylori
beta-572 animal and human associated microbiota, intestinal microbiota 16S Candidatus Snodgrassella alvi or Beta (symbiotic Neisseriaceae phylotype in honey bee)
OalgGAM445 symbiotic microbes, S-oxidizing (sulfur-oxidizing) bacteria 16S Gammaproteobacterial, sulfur-oxidizing symbiont of Olavius algarvensis
OalgDEL136 symbiotic microbes, sulfate-reducing microbes 16S Deltaproteobacterial symbiont of Olavius algarvensis
I. leu. (IleuSYM581) symbiotic microbes 16S Gammaproteobacterial symbiont of Inanidrilus leukodermatus
O. tan. (OtanSYM581) symbiotic microbes 16S Gammaproteobacterial symbiont of Olavius tantalus
PRYM02 eukaryotes 18S Prymnesiophyceae
PTB-6-7/1030 - 16S PTB 6/7 cluster
PTB-6-7/997 - 16S PTB 6/7 cluster
PTB-1/482 - 16S PTB 1 cluster, Stappia stellulata, bacterium (AB010864)
PTB-1/1014 - 16S PTB 1 cluster, Stappia stellulata
PTB-all/646 - 16S Alphaproteobacterial clade (all PTB)
PELA02 eukaryotes 18S Pelagophyceae clade containing Aureococcus, Pelagomonas, Pulvinaria, CCMP 1395
PELA01 eukaryotes 18S Pelagophyceae
PAO462 bacteria of relevance in wastewater treatment 16S Candidatus Accumulibacter phosphatis
Rc988 bacteria of relevance in wastewater treatment 16S Rhodocyclus spp., Candidatus Accumulibacter phosphatis, and related bacteria