List of probes and primers

2970 probes found.

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Probe name Full name (Alm et al.) Category Target rRNA Specificity FISH Primer
Bak1408 — - 16S Candidatus Magnospira bakii ✔ ✘
ARC94 — - 16S Arcobacter ✔ ✘
ARC1430 — - 16S Arcobacter ✔ ✘
ACA652b — - 16S some unknown Acinetobacter-like species ✔ ✘
T25-1028 — - 16S clone T25 and T19 of a subgroup within the Betaproteobacteria ✔ ✘
T25-220 — - 16S clone T25 and other clones of a subgroup within the Betaproteobacteria, not clone T19 ✔ ✘
T28-649 — - 16S clone T28 and T29 of a subgroup within the Alphaproteobacteria, Sphingomonas capsulata ✔ ✘
T28-1435 — - 16S clone T28 and T29 of a subgroup within the Alphaproteobacteria ✔ ✘
III1421 — - 16S cluster III of Clostridiaceae ✘ ✘
IV815 — - 16S cluster IV of Clostridiaceae ✘ ✘
IX854 — - 16S cluster IX of Clostridiaceae ✘ ✘
UCA1124 — - 16S Firmicutes (low G+C Gram-positives) subgroup ✘ ✘
UCB807 — - 16S Firmicutes (low G+C Gram-positives) subgroup ✘ ✘
UCC926 — - 16S Firmicutes (low G+C Gram-positives) subgroup ✘ ✘
CFB935 — - 16S Bacteroides-Porphyromonas-Prevotella subgroup ✘ ✘
BLS1295 — - 16S Bacillus-Lactobacillus-Streptococcus subgroup ✘ ✘
SPIRO1400 — - 16S subgroup of the Spirochaetaceae ✘ ✘
GAM42_C1033 — - 23S currently unknown ✔ ✘
Lbrev — - 16S Lactobacillus brevis ✔ ✘
Lcoll — - 16S Lactobacillus collinoides ✔ ✘
Lcory — - 16S Lactobacillus coryniformis ✔ ✘
Lfarc — - 16S Lactobacillus farciminis ✔ ✘
Lhilg — - 16S Lactobacillus hilgardii ✔ ✘
Lmali — - 16S Lactobacillus mali ✔ ✘
Lpara — - 16S Lactobacillus casei, Lactobacillus paracasei ✔ ✘