List of probes and primers

2970 probes found.

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Probe name Full name (Alm et al.) Category Target rRNA Specificity FISH Primer
MIB661 S-S-Bacm-0661-a-A-18 bacteria of medical or hygienical relevance 16S mouse intestinal bacteria ✔ ✘
MIB724 S-S-Bacm-0724-a-A-18 bacteria of medical or hygienical relevance 16S mouse intestinal bacteria ✔ ✘
LGC — - 16S Firmicutes (low G+C Gram-positives) ✔ ✘
Clost I — acetogenic bacteria 16S subgroup of Clostridia cluster I and II ✔ ✘
AW — acetogenic bacteria 16S some Acetobacterium species, E. limosum ✔ ✘
DSV (DSV321) — acetogenic bacteria, sulfate-reducing microbes 16S Some Desulfovibrionaceae, Desulfomicrobiaceae, Desulfohalobiaceae, and other Bacteria ✔ ✘
AMAR 839 S-G-AMAR-0839-a-A-22 bacteria of relevance in wastewater treatment 16S Amaricoccus spp. ✔ ✘
Cpara — eukaryotes 18S Candida parapsilosis ✘ ✘
FNEC — bacteria of medical or hygienical relevance 16S Fusobacterium necrophorum ✘ ✘
RSOLA — - 23S Ralstonia solanacearum, Ralstonia syzygii, blood disease bacterium (BLDB) ✔ ✘
RSOLB — - 23S Ralstonia solanacearum, Ralstonia syzygii, blood disease bacterium (BLDB) ✔ ✘
TTI-732 — symbiotic microbes 16S Treponema cluster I ✔ ✘
Dev1-486 — symbiotic microbes 16S ectosymbiotic spirochetes on Devescovina sp. and Stephanonympha sp. ✔ ✘
Dev14-486 — symbiotic microbes 16S ectosymbiotic spirochetes on Devescovina sp. and Stephanonympha sp. ✔ ✘
Dev14-Tp652 — symbiotic microbes 16S ectosymbiotic spirochetes on Devescovina sp. and Stephanonympha sp. ✔ ✘
Oxy8-Tp444 — symbiotic microbes 16S ectosymbiotic spirochetes on Oxymonas sp. and Stephanonympha sp. ✔ ✘
Oxy26-Tp1281 — symbiotic microbes 16S ectosymbiotic spirochetes on Oxymonas sp. and Stephanonympha sp. ✔ ✘
Doh299 — eukaryotes 18S AMD Dothideomycete fungi ✔ ✘
Eur1108 — eukaryotes 18S Eurotiomycetes, including AMD fungi ✔ ✘
Oil845 — eukaryotes 18S AMD Dothideomycete fungi ✔ ✘
AcRic90 S-*-AcEnd-0090-a-A-18 symbiotic microbes 16S Rickettsia-related endosymbionts of Acanthamoeba strains UWC8 and UWC36 ✔ ✘
AcRic1196 S-*-AcEnd-1196-a-A-18 symbiotic microbes 16S Rickettsia-related endosymbionts of Acanthamoeba strains UWC8 and UWC36 ✔ ✘
1109TY1R — symbiotic microbes 16S Methanobrevibacter-related endosymbionts of Reticulitermes speratus ✘ ✘
1109TY2R — symbiotic microbes 16S Methanobrevibacter-related endosymbionts of Reticulitermes speratus ✘ ✘
1109TY3R — symbiotic microbes 16S Methanobrevibacter-related endosymbionts of Reticulitermes speratus ✘ ✘