List of probes and primers

2970 probes found.

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Probe name Full name (Alm et al.) Category Target rRNA Specificity FISH Primer
1174TY1R — symbiotic microbes 16S Methanobrevibacter-related endosymbionts of Reticulitermes speratus ✘ ✘
1174TY2R — symbiotic microbes 16S Methanobrevibacter-related endosymbionts of Reticulitermes speratus ✘ ✘
1174TY3R — symbiotic microbes 16S Methanobrevibacter-related endosymbionts of Reticulitermes speratus ✘ ✘
MPH-730 — methanogenic archaea 16S Methylophaga ✔ ✘
MPHm-994 — methanogenic archaea 16S Methylophaga marina ✔ ✘
REX72 — - 16S Bacillus ✔ ✘
LGC353b — - 16S Bacillus ✔ ✘
prV2 — symbiotic microbes 16S uncultured alphaproteobacterium ✘ ✘
prV6 — symbiotic microbes 16S uncultured alphaproteobacterium ✘ ✘
prV8 — symbiotic microbes 16S uncultured alphaproteobacterium ✘ ✘
B6 — bacteria of medical or hygienical relevance 16S subgroup of Brucella spp. ✘ ✘
B9 — bacteria of medical or hygienical relevance 16S subgroup of Brucella spp. ✘ ✘
B13 — bacteria of medical or hygienical relevance 16S subgroup of Brucella spp. ✘ ✘
Ap665 — eukaryotes 18S Aureobasidium pullulans ✘ ✘
Ch614 — eukaryotes 18S Cladosporium herbarum ✘ ✘
U519 — higher taxonomic levels 16S all known 18S-like rRNA sequences ✘ ✘
Aph1180 S-G-Aph-1180-a-A-18 symbiotic microbes 16S Candidatus Amoebophilus asiaticus ✔ ✘
Rhabdo S-S-RhaC-0992-a-A symbiotic microbes 16S Candidatus Rhabdochlamydia porcellionis ✔ ✘
SBR9-1a S-D-s91a-0578-b-A-20 bacteria of relevance in wastewater treatment 16S Alphaproteobacterial SBR9 clone 1 (AY254694) ✔ ✘
SBR9-1b S-D-s91a-0778-b-A-18 bacteria of relevance in wastewater treatment 16S Alphaproteobacterial SBR9 clone 1 (AY254694) ✔ ✘
Staph747 S-G-Staph-0747-a-A-19 bacteria of medical or hygienical relevance 16S Staphylococcus spp. ✘ ✘
PAG59 S-G-Pan-0059-a-A-18 - 16S Pantoea spp. ✔ ✘
Rick_527 S-F-Rick-0527-a-A-16 symbiotic microbes 16S members of the Rickettsiaceae family Caedibacter caryophilus ✘ ✘
Rick_1442 S-F-Rick-1442-a-A-18 symbiotic microbes 16S members of the Rickettsiaceae family ✘ ✘
ARM980 — higher taxonomic levels 16S novel AMD euryarchaeota ✘ ✘