List of probes and primers

2970 probes found.

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Probe name Full name (Alm et al.) Category Target rRNA Specificity FISH Primer
EICO — bacteria of medical or hygienical relevance 16S Eikenella corrodens ✘ ✘
CARE — bacteria of medical or hygienical relevance 16S Campylobacter rectus ✘ ✘
PnecABCD-445 — - 16S Polynucleobacter cluster ✔ ✘
Actino-221 S-S-Actino-221-a-A-18 bacteria of relevance in wastewater treatment 16S Actinobacterial PAO ✔ ✘
Actino-658 S-S-Actino-658-a-A-18 bacteria of relevance in wastewater treatment 16S Actinobacterial PAO ✔ ✘
Ih820 S-*-Ih820-0820-a-A-18 syntrophic microbes, sulfate-reducing microbes 16S Desulfotomaculum subcluster Ih (Pelotomaculum and Cryptanaerobacter) ✔ ✘
ProCo1264 S-*-ProCo-1264-a-A-23 bacteria of medical or hygienical relevance 16S Ruminococcus productus and relatives ✔ ✘
Csac67 S-S-Csac-67-a-A-20 bacteria of medical or hygienical relevance 16S Clostridium saccharogumia ✔ ✘
Betthio1001 L-G-bThiob-1001-a-A-21 S-oxidizing (sulfur-oxidizing) bacteria 23S Betaproteobacterial Thiobacilli ✔ ✘
Creno445 S-S-Cpoly-445-a-A-18 methylotrophic bacteria 16S Crenothrix polyspora ✔ ✘
Cp653-A — methylotrophic bacteria 16S Crenothrix polyspora sequence cluster I ✔ ✘
Cp653-B — methylotrophic bacteria 16S Crenothrix polyspora sequence cluster II-IV ✔ ✘
Cp1130-A — methylotrophic bacteria 16S Crenothrix polyspora sequence cluster I-II ✔ ✘
Cp1130-B — methylotrophic bacteria 16S Crenothrix polyspora sequence cluster III-IV ✔ ✘
VIB572a — - 16S Genus Vibrio ✔ ✘
VIB572b — - 16S other Vibrio/Photobacterium ✘ ✘
PSU730 — - 16S Genus Pseudoalteromonas ✔ ✘
SHEW227 — - 16S Genus Shewanella ✔ ✘
MX825b — methanogenic archaea 16S Methanosaetaceae subgroup ✔ ✘
MX825c — methanogenic archaea 16S Methanosaetaceae subgroup ✔ ✘
MX1361 — methanogenic archaea 16S Methanosaetaceae ✔ ✘
MG1200b — methanogenic archaea 16S most Methanomicrobiales ✔ ✘
MB311 — methanogenic archaea 16S Methanobacteriales ✔ ✘
MC504 — methanogenic archaea 16S Methanocaldococcaceae ✔ ✘
CST440 — cellulose-decomposing bacteria 16S Group 1 clones (AC044 and AC051), closely related to Clostridium stercorarium ✔ ✘