List of probes and primers

2970 probes found.

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Probe name Full name (Alm et al.) Category Target rRNA Specificity FISH Primer
Caul-1262 S-*-Caul-1262-a-A-18 bacteria of relevance in wastewater treatment 16S some Caulobacterales
Ubac-1430 S-*-Ubac-1430-a-A-18 bacteria of relevance in wastewater treatment 16S some unclassified Bacteria
Ubac-1241 S-*-Ubac-1241-a-A-18 bacteria of relevance in wastewater treatment 16S some unclassified Bacteria
uBet-0984 S-*-uBet-0984-a-A-18 bacteria of relevance in wastewater treatment 16S some unclassified Betaproteobacteria
Ubet-0834 S-*-Ubet-0834-a-A-18 bacteria of relevance in wastewater treatment 16S some unclassified Betaproteobacteria
Ubet-0990 S-*-Ubet-0990-a-A-21 bacteria of relevance in wastewater treatment 16S some unclassified Betaproteobacteria
Rhoc-0998 S-*-Rhoc-0998-a-A-18 bacteria of relevance in wastewater treatment 16S some Rhodocyclaceae
Rhoc-1425 S-*-Rhoc-1425-a-A-18 bacteria of relevance in wastewater treatment 16S some unclassified Rhodocyclaceae
Thio-1032 S-*-Thio-1032-a-A-18 bacteria of relevance in wastewater treatment 16S some Thiobacillus and some unclassified Betaproteobacteria
Ach-221 bacteria of medical or hygienical relevance 16S Achromobacter xylosoxidans
Alc-476 bacteria of medical or hygienical relevance 16S Alcaligenes faecalis
Univ907 S-*-Univ-0907-a-A-18 higher taxonomic levels 16S all organism
Eub927 S-D-Eub-0927-a-A-18 higher taxonomic levels 16S most Bacteria
NmII S-S-Nsom-0120-a-A-20 ammonia-oxidizing bacteria 16S Nitrosomonas communis lineage
NmIII S-S-Nsom-0998-a-A-21 ammonia-oxidizing bacteria 16S Nitrosomonas marina lineage
NmIV S-S-Nsom-1004-a-A-19 ammonia-oxidizing bacteria 16S Nitrosomonas cryotolerans lineage
Nsr1145 S-*-Nsr-1145-a-A-18 nitrite-oxidizing bacteria 16S Nitrospira spp.
Nsc825 S-*-Nsc-0825-a-A-18 ammonia-oxidizing bacteria 16S betaproteobacterial AOB
Nsr989 S-S-Nsr-0989-a-A-18 nitrite-oxidizing bacteria 16S Nitrospira marina
Nsn227 S-*-Nsn-0227-a-A-18 nitrite-oxidizing bacteria 16S Nitrospina gracilis
Ncc214 S-S-Ncc-0214-a-A-18 nitrite-oxidizing bacteria 16S Nitrococcus mobilis
Flavo1004 S-St-Iso8-1004-a-A-18 - 16S Flavobacterium isolate 8
CLOBU1022 S-S-Cl.bu.-1022-a-A-18 - 16S Clostridium butyricum, Elbe `river snowapos isolates 9.1, 9.2, 9.4
AERO1244 S-G-Aero-1244-a-A-21 higher taxonomic levels 16S Aeromonadaceae
HGC236 higher taxonomic levels 16S Actinobacteria