List of probes and primers

2970 probes found.

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Probe name Full name (Alm et al.) Category Target rRNA Specificity FISH Primer
AOST01 L-S-A.ost-484(A. ostenfeldii)-a-A-18 - 28S Alexandrium ostenfeldii ✔ ✘
AOST02 S-S-A.ost-0232(A. ostenfeldii)-a-A-18 - 18S Alexandrium ostenfeldii ✔ ✘
Bfi826 S-S-But-0826-a-18 - 16S Butyrivibrio fibrisolvens-related clones, phylum Firmicutes ✔ ✘
Rum831 S-S-Rum-0831-a-16 - 16S Rumen clones in family Ruminococcaceae, phylum Firmicutes ✔ ✘
Lac435 S-S-Lac-0435-a-16 - 16S Clones in family Lachnospiraceae, phylum Firmicutes ✔ ✘
Ral1436 S-S-Rum-1436-15 - 16S Ruminococcus albus-related clones, phylum Firmicutes ✔ ✘
Rfl155 S-S-Rum-0155-a-15 - 16S Ruminococcus flavefaciens-related clones, phylum Firmicutes ✔ ✘
Bac1080 S-S-Bac-1080-a-18 - 16S Clones in order Bacteroidales, phylum Bacteroidetes ✔ ✘
fir5-575 — animal and human associated microbiota, intestinal microbiota 16S Firm-5 (symbiotic Firmicutes phylotype in honey bee) ✔ ✘
But1243 S-S-But-1243-a-18 - 16S rumen Butyrivibrio clones ✔ ✘
Clo549 S-S-Clo-0549-a-18 - 16S unclassified Rumen Clostridia clones ✔ ✘
Inc852 S-S-Inc-0852-a-18 - 16S Rumen Inceatae Sedis XIII clones ✔ ✘
Pse1257 S-S-Pse-1257-18 - 16S Rumen Pseudobutyrivibrio clones ✔ ✘
Ace731 S-S-0731-a-18 - 16S Rumen Acetivibrio clones ✔ ✘
Vei732 S-S-0732-a-18 - 16S Rumen Veillonellaceae clones ✔ ✘
CV1 — - 18S Chromera velia ✘ ✘
Pseudo120 — - 16S rRNA group I pseudomonads ✔ ✘
SUB 196 — - 16S Streptococcus uberis ✔ ✘
APYO 183 — - 16S Arcanobacterium pyogenes ✔ ✘
CYL — - 16S Cylindrospermopsis raciborskii ✘ ✘
Syner195 — - 16S Synergistes group 4 (Synergistetes PD-UASB-13) ✔ ✘
Lmon — - 16S Listeria monocytogenes ✔ ✘
CLOSs146 S-S-CLOS-0146-a-18 - 16S Incertae Sedis XI ✔ ✘
CLOSs654 S-S-CLOS-0654-a-18 - 16S Grocilibacteraceae ✔ ✘
RUMs278 S-S-Rum-0278-a-18 - 16S Ruminococcaceae ✔ ✘