List of probes and primers

2970 probes found.

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Probe name Full name (Alm et al.) Category Target rRNA Specificity FISH Primer
Rbla1372 — - 16S Rhodobacter blasticus ✔ ✘
Rbmr151 — - 16S Rhodobium marinum, Rhodopseudomonas julia ✔ ✘
Rvsl139 — - 16S Rhodovulum sulfidophilum ✔ ✘
Cboid198 S-S-C.boid-0198-a-A-18 - 18S Candida boidinii ✔ ✘
KIN516 — - 18S Kinetoplastida ✔ ✘
CFX197 S-*-Bact-0197-a-A-18 - 16S Eikelboom type 0092 Chloroflexi ✔ ✘
CFX223 S-*-Bact-0223-a-A-18 - 16S Eikelboom type 0092 Chloroflexi ✔ ✘
CFX67a S-*-Bact-0067-a-A-18 - 16S Eikelboom type 0914 Chloroflexi ✔ ✘
CFX67b S-*-Bact-0067-b-A-18 - 16S Eikelboom type 0914 Chloroflexi ✔ ✘
NITROSO4E — - 16S b-Proteobacterial ammonia oxidizers (also Nodularia sp.) ✘ ✘
NSM1B — - 16S Nitrosomonas europaea, Nitrosomonas eutropha, Nitrosococcus mobilis ✘ ✘
NBAC2 — - 16S Nitrobacter winogradskyi, Nitrobacter hamburgensis, Nitrobacter agilis (also Afipia clevelandensis, Afipia felis, Rhodopseudomonas palustris strain, Bradyrhizobium japonicume) ✘ ✘
ERY174 — - 16S Some Novosphingomonas, Erythrobacter and Porphyrobacter ✔ ✘
PARA739 — - 16S Order Rhodobacterales ✔ ✘
RHIZ1244 — - 16S Order Rhizobiales ✔ ✘
Lepto175 — - 16S Leptothrix ochracea ✔ ✘
Proti_445 S-G-Proti-0445-a-A-19 - 16S primary symbiont of Euplotes samples POH1, EM, FL(12)-VI ✘ ✘
Proti_467 S-G-Proti-0467-a-A-18 - 16S primary symbiont of Euplotes samples POH1, EM, FL(12)-VI ✘ ✘
Dbact653 S-F-Dsb-0653-a-A-18 - 16S Desulfococcus/Desulfosarcina/Desulfonema ✔ ✘
DSU655 — - 16S Genus Desulfurella ✔ ✘
ATAM01 S-S-A.tam-0775(A. Tamarense)-a-A-18 - 18S Alexandrium tamarense species complex ✔ ✘
ATNA02 L-St-At.NA-373(A. tamarense)-a-A-18 - 28S Alexandrium tamarense /North American clade/Orkney strains ✔ ✘
ATWE03 — - 28S Alexandrium tamarense /Western European clade ✔ ✘
ATME04 — - 28S Alexandrium tamarense / Mediterranean clade ✔ ✘
DINO01 S-C-DINO-1404(A. tamarense)-a-A-20 - 18S Dinoflagellates / Dinophyceae ✔ ✘