List of references at probeBase

Clear filter
Reference title Pubmed-ID
Oligonucleotide probes based on 16S rRNA sequences for the identification of four Azospirillum species. Kabir MM, Faure D, Haurat J, Normand P, Jacoud C, Wadoux P, Bally R. Canadian journal of microbiology. 1995. 8542552
Denaturing gradient gel electrophoresis profiles of 16S rRNA-defined populations inhabiting a hot spring microbial mat community. Ferris MJ, Muyzer G, Ward DM. Applied and environmental microbiology. 1996. 8593039
Development of an oligonucleotide probe for Aureobasidium pullulans based on the small-subunit rRNA gene. Li S, Cullen D, Hjort M, Spear R, Andrews JH. Applied and environmental microbiology. 1996. 8633850
In situ visualization of high genetic diversity in a natural microbial community. Amann R, Snaidr J, Wagner M, Ludwig W, Schleifer KH. Journal of bacteriology. 1996. 8655546
Comparative analysis of nitrifying bacteria associated with freshwater and marine aquaria. Hovanec TA, DeLong EF. Applied and environmental microbiology. 1996. 8702281
Application of a suite of 16S rRNA-specific oligonucleotide probes designed to investigate bacteria of the phylum cytophaga-flavobacter-bacteroides in the natural environment. Manz W, Amann R, Ludwig W, Vancanneyt M, Schleifer KH. Microbiology (Reading, England). 1996. 8704951
Phylogenetic probes for analyzing abundance and spatial organization of nitrifying bacteria. Mobarry BK, Wagner M, Urbain V, Rittmann BE, Stahl DA. Applied and environmental microbiology. 1996. 8787412
Molecular phylogeny and in situ detection of the etiologic agent of necrotizing hepatopancreatitis in shrimp. Loy JK, Dewhirst FE, Weber W, Frelier PF, Garbar TL, Tasca SI, Templeton JW. Applied and environmental microbiology. 1996. 8795235
Sequence heterogeneities of genes encoding 16S rRNAs in Paenibacillus polymyxa detected by temperature gradient gel electrophoresis. Nübel U, Engelen B, Felske A, Snaidr J, Wieshuber A, Amann RI, Ludwig W, Backhaus H. Journal of bacteriology. 1996. 8824607
Degradative capacities and 16S rRNA-targeted whole-cell hybridization of sulfate-reducing bacteria in an anaerobic enrichment culture utilizing alkylbenzenes from crude oil. Rabus R, Fukui M, Wilkes H, Widdle F. Applied and environmental microbiology. 1996. 8837415
Distribution of bacterial populations in a stratified fjord (Mariager Fjord, Denmark) quantified by in situ hybridization and related to chemical gradients in the water column. Ramsing NB, Fossing H, Ferdelman TG, Andersen F, Thamdrup B. Applied and environmental microbiology. 1996. 8919801
Population analysis in a denitrifying sand filter: conventional and in situ identification of Paracoccus spp. in methanol-fed biofilms. Neef A, Zaglauer A, Meier H, Amann R, Lemmer H, Schleifer KH. Applied and environmental microbiology. 1996. 8953706
Identifying numerically abundant culturable bacteria from complex communities: an example from a lignin enrichment culture. González JM, Whitman WB, Hodson RE, Moran MA. Applied and environmental microbiology. 1996. 8953714
Characterization of universal small-subunit rRNA hybridization probes for quantitative molecular microbial ecology studies. Zheng D, Alm EW, Stahl DA, Raskin L. Applied and environmental microbiology. 1996. 8953722
Vertical distribution and phylogenetic characterization of marine planktonic Archaea in the Santa Barbara Channel. Massana R, Murray AE, Preston CM, DeLong EF. Applied and environmental microbiology. 1997. 8979338
Obligate intracellular bacterial parasites of acanthamoebae related to Chlamydia spp. Amann R, Springer N, Schönhuber W, Ludwig W, Schmid EN, Müller KD, Michel R. Applied and environmental microbiology. 1997. 8979345
Spirochetes from digital dermatitis lesions in cattle are closely related to treponemes associated with human periodontitis. Choi BK, Nattermann H, Grund S, Haider W, Göbel UB. International journal of systematic bacteriology. 1997. 9019153
Development and application of 16S rRNA-targeted probes for detection of iron- and manganese-oxidizing sheathed bacteria in environmental samples. Siering PL, Ghiorse WC. Applied and environmental microbiology. 1997. 9023942
Group-specific small-subunit rRNA hybridization probes to characterize filamentous foaming in activated sludge systems. de los Reyes FL, Ritter W, Raskin L. Applied and environmental microbiology. 1997. 9055425
Identification and quantification of Bifidobacterium species isolated from food with genus-specific 16S rRNA-targeted probes by colony hybridization and PCR. Kaufmann P, Pfefferkorn A, Teuber M, Meile L. Applied and environmental microbiology. 1997. 9097423
Population structure of microbial communities associated with two deep, anaerobic, alkaline aquifers. Fry NK, Fredrickson JK, Fishbain S, Wagner M, Stahl DA. Applied and environmental microbiology. 1997. 9097447
Fluorescent oligonucleotide rDNA probes that specifically bind to a common nanoflagellate, Paraphysomonas vestita. Rice J, O'Connor CD, Sleigh MA, Burkill PH, Giles IG, Zubkov MV. Microbiology (Reading, England). 1997. 9168621
In situ analysis of denitrifying toluene- and m-xylene-degrading bacteria in a diesel fuel-contaminated laboratory aquifer column. Hess A, Zarda B, Hahn D, Häner A, Stax D, Höhener P, Zeyer J. Applied and environmental microbiology. 1997. 9172330
Phylogenetic analysis and in situ identification of bacteria in activated sludge. Snaidr J, Amann R, Huber I, Ludwig W, Schleifer KH. Applied and environmental microbiology. 1997. 9212435
Whole-cell hybridization of Methanosarcina cells with two new oligonucleotide probes. Sørensen AH, Torsvik VL, Torsvik T, Poulsen LK, Ahring BK. Applied and environmental microbiology. 1997. 9251192