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Enumeration of Bacteroides species in human faeces by fluorescent in situ hybridisation combined with flow cytometry using 16S rRNA probes. Rigottier-Gois L, Rochet V, Garrec N, Suau A, Doré J. Systematic and applied microbiology. 2003. |
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Oligonucleotide probes that detect quantitatively significant groups of butyrate-producing bacteria in human feces. Hold GL, Schwiertz A, Aminov RI, Blaut M, Flint HJ. Applied and environmental microbiology. 2003. |
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Phylogenetic analysis identifies the 'megabacterium' of birds as a novel anamorphic ascomycetous yeast, Macrorhabdus ornithogaster gen. nov., sp. nov. Tomaszewski EK, Logan KS, Snowden KF, Kurtzman CP, Phalen DN. International journal of systematic and evolutionary microbiology. 2003. |
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Development of specific fluorescent oligonucleotide probes for in situ identification of wine lactic acid bacteria. Blasco L, Ferrer S, Pardo I. FEMS microbiology letters. 2003. |
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Characterization of microbial communities in gas industry pipelines. Zhu XY, Lubeck J, Kilbane JJ. Applied and environmental microbiology. 2003. |
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Filamentous "Epsilonproteobacteria" dominate microbial mats from sulfidic cave springs. Engel AS, Lee N, Porter ML, Stern LA, Bennett PC, Wagner M. Applied and environmental microbiology. 2003. |
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Extremely acidophilic protists from acid mine drainage host Rickettsiales-lineage endosymbionts that have intervening sequences in their 16S rRNA genes. Baker BJ, Hugenholtz P, Dawson SC, Banfield JF. Applied and environmental microbiology. 2003. |
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Development and use of fluorescent 16S rRNA-targeted probes for the specific detection of Methylophaga species by in situ hybridization in marine sediments. Janvier M, Regnault B, Grimont P. Research in microbiology. 2003. |
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Detection of the free-living forms of sulfide-oxidizing gill endosymbionts in the lucinid habitat (Thalassia testudinum environment). Gros O, Liberge M, Heddi A, Khatchadourian C, Felbeck H. Applied and environmental microbiology. 2003. |
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Fingerprinting microbial assemblages from the oxic/anoxic chemocline of the Black Sea. Vetriani C, Tran HV, Kerkhof LJ. Applied and environmental microbiology. 2003. |
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Diversity and structure of bacterial communities in Arctic versus Antarctic pack ice. Brinkmeyer R, Knittel K, Jürgens J, Weyland H, Amann R, Helmke E. Applied and environmental microbiology. 2003. |
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The isotope array, a new tool that employs substrate-mediated labeling of rRNA for determination of microbial community structure and function. Adamczyk J, Hesselsoe M, Iversen N, Horn M, Lehner A, Nielsen PH, Schloter M, Roslev P, Wagner M. Applied and environmental microbiology. 2003. |
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Detection of Gallibacterium spp. in chickens by fluorescent 16S rRNA in situ hybridization. Bojesen AM, Christensen H, Nielsen OL, Olsen JE, Bisgaard M. Journal of clinical microbiology. 2003. |
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Review and re-analysis of domain-specific 16S primers. Baker GC, Smith JJ, Cowan DA. Journal of microbiological methods. 2003. |
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Molecular approaches for the detection and identification of bifidobacteria and lactobacilli in the human gastrointestinal tract. Satokari RM, Vaughan EE, Smidt H, Saarela M, Mättö J, de Vos WM. Systematic and applied microbiology. 2003. |
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Multiplex FISH analysis of a six-species bacterial biofilm. Thurnheer T, Gmür R, Guggenheim B. Journal of microbiological methods. 2004. |
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Use of stable-isotope probing, full-cycle rRNA analysis, and fluorescence in situ hybridization-microautoradiography to study a methanol-fed denitrifying microbial community. Ginige MP, Hugenholtz P, Daims H, Wagner M, Keller J, Blackall LL. Applied and environmental microbiology. 2004. |
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Gingival crevice microbiota from Chinese patients with gingivitis or necrotizing ulcerative gingivitis. Gmür R, Wyss C, Xue Y, Thurnheer T, Guggenheim B. European journal of oral sciences. 2004. |
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Identification of planctomycetes with order-, genus-, and strain-specific 16S rRNA-targeted probes. Gade D, Schlesner H, Glöckner FO, Amann R, Pfeiffer S, Thomm M. Microbial ecology. 2004. |
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Ecophysiological interaction between nitrifying bacteria and heterotrophic bacteria in autotrophic nitrifying biofilms as determined by microautoradiography-fluorescence in situ hybridization. Kindaichi T, Ito T, Okabe S. Applied and environmental microbiology. 2004. |
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Demonstration of Brachyspira aalborgi lineages 2 and 3 in human colonic biopsies with intestinal spirochaetosis by specific fluorescent in situ hybridization. Jensen TK, Teglbjaerg PS, Lindboe CF, Boye M. Journal of medical microbiology. 2004. |
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'Candidatus Rhabdochlamydia porcellionis', an intracellular bacterium from the hepatopancreas of the terrestrial isopod Porcellio scaber (Crustacea: Isopoda). Kostanjsek R, Strus J, Drobne D, Avgustin G. International journal of systematic and evolutionary microbiology. 2004. |
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Micromanipulation and further identification of FISH-labelled microcolonies of a dominant denitrifying bacterium in activated sludge. Thomsen TR, Nielsen JL, Ramsing NB, Nielsen PH. Environmental microbiology. 2004. |
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Identification, detection, and spatial resolution of Clostridium populations responsible for cellulose degradation in a methanogenic landfill leachate bioreactor. Burrell PC, O'Sullivan C, Song H, Clarke WP, Blackall LL. Applied and environmental microbiology. 2004. |
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