List of probes and primers

2970 probes found.

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Probe name Full name (Alm et al.) Category Target rRNA Specificity FISH Primer
DEN1454 - 16S Acetate-denitrifying cluster
FB648 - 16S Thioturbo danicus and strain DK4
FB741 - 16S Thioturbo danicus and strain DK4
FB842 - 16S Strain DK4
Rotcl1 - 16S Cluster related to Methanosaeta concilii
Rotcl2 - 16S Cluster related to endosymbiont of P. nasuta
Rotp13 - 16S Clone Rot13
Rotp17 - 16S Clone Rot17
WPF464 - 16S filaments from hydrothermal vents near White Point
VSO673 - 16S Unattached, vacuolate, sulfur-oxidizing bacteria
Chlorb I 440 S-*-Chlorb I-0440-a-A-20 - 16S phylotype affiliated with the familiy Chlorobiaceae (DGGE band 21ws)
Chlorb II 842 S-*-Chlorb II-0842-a-A-20 - 16S phylotype affiliated with the familiy Chlorobiaceae (DGGE band 24ws)
Chlorb III 441 S-*-Chlorb III-0441-a-A-20 - 16S phylotype affiliated with the familiy Chlorobiaceae (DGGE bands 25s, 26s)
DEN67 - 16S Methanol-utilizing denitrifying cluster group A closely related to the obligate methylotrophs Methylobacillus and Methylophilus in the order Methylophilales
MET1216 - 16S Order Methylophilales
SAP553 - 16S Mostly Saprospiraceae family
AEHY - 16S Aeromonas hydrophila
AESA - 16S Aeromonas salmonicida subsp. Salmonicida
EDIC - 16S Edwardsiella ictaluri
ESCO - 16S Escherichia coli
FLBR - 16S Flavobacterium branchiophilum
FLCO - 16S Flavobacterium columnare
FLPS - 16S Flavobacterium psychrophilum
TEMA - 16S Tenacibaculum maritimum
MYCH - 16S Mycobacterium chelonae