List of probes and primers

2970 probes found.

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Probe name Full name (Alm et al.) Category Target rRNA Specificity FISH Primer
XenoGam727 - 16S Xenoturbella bocki gammaproteobacterial endosymbiont and relatives
SymLl1251 - 16S L. lacteus symbiont
SymAf576 - 16S A. fragilis symbiont
SymAf1272 - 16S A. fragilis symbiont
Symco2 - 16S C. orbicularis symbiont
Rhodano 227 S-*-Rno-0227-a-A-21 - 16S Uncultured Rhodanobacter species closely related to Rhodanobacter thiooxydans
LEE82 - 16S Some members of the genus Leeuwenhoenkiella
DOK827 - 16S Some members of the genus Dokdonia
FL197 - 16S marine uncultured Flavobacteria clade VIS4
VIS6-814 - 16S marine uncultured Flavobacteria clade VIS6
VIS5-586 - 16S marine uncultured Flavobacteria clade VIS5
FL845 - 16S marine uncultured Flavobacteria clade VIS2
VIS3-183 - 16S marine uncultured Flavobacteria clade VIS3
VIS1-575 - 16S marine uncultured Flavobacteria clade VIS1
PSE227 - 16S Pseudomonas spp.
PSE1284 - 16S Pseudomonas spp.
TOL1028 S-S-TOL-1028-a-A-18 - 16S Strain TOL (from oleate enrichment)
TSP436 S-*-0436-a-A-18 - 16S Clones TPA, TST, and JA2 (from Palmitate, Stearate, and Oleate enrichments, respectively)
MPA1446 S-*-1446-a-A-18 - 16S Strain MPA (from Palmitate enrichment)
MST445 S-*-0445-a-A-18 - 16S Clone MST (from Stearate enrichment)
MSP1445 S-*-1445-a-A-18 - 16S Clones MOL and MLI (from Oleate and Linoleate enrichment, respectively)
DEN220 - 16S Acetate-denitrifying cluster and some members of the Comamonadaceae family
DEN220a - 16S Acetate-denitrifying cluster and some members of the Rhodocyclaceae family
DEN441 - 16S Acetate-denitrifying cluster and some members of the Rhodocyclaceae family
DEN444 - 16S Acetate-denitrifying cluster