List of probes and primers

2970 probes found.

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Probe name Full name (Alm et al.) Category Target rRNA Specificity FISH Primer
IRog1 — higher taxonomic levels 16S phylum Acidobacteria group a ✘ ✘
IRog2 — higher taxonomic levels 16S phylum Acidobacteria group a ✘ ✘
LEG226 — bacteria of medical or hygienical relevance 16S Legionellaceae ✔ ✘
LEG705 — bacteria of medical or hygienical relevance 16S Legionella ✔ ✘
LEGPNE1 — bacteria of medical or hygienical relevance 16S Legionella pneumophila ✔ ✘
LGC354A — higher taxonomic levels 16S Firmicutes (Gram-positive bacteria with low G+C content) ✔ ✘
LGC354B — higher taxonomic levels 16S Firmicutes (Gram-positive bacteria with low G+C content) ✔ ✘
LGC354C — higher taxonomic levels 16S Firmicutes (Gram-positive bacteria with low G+C content) ✔ ✘
LM3 S-G-Bif-1412-a-A-21 animal and human associated microbiota, intestinal microbiota 16S Bifidobacterium genus ✘ ✘
MB1 — methanogenic archaea 16S Methanosarcina frisius, Methanosarcina sp., Methanosarcina acidovorans, Methanosarcina thermophila, Methanosarcina barkeri ✘ ✘
MB1174 — methanogenic archaea 16S Methanobacterium spp., Methanobrevibacter spp., Methanosphaera spp. ✔ ✘
MB3 — methanogenic archaea 16S Methanosarcina frisius, Methanosarcina acidovorans, Methanosarcina thermophila, Methanosarcina barkeri ✘ ✘
MB310 — methanogenic archaea 16S Methanobacterium spp., Methanobrevibacter spp., Methanosphaera spp. ✘ ✘
MB4 — methanogenic archaea 16S Methanosarcina thermophila, Methanosarcina barkeri ✘ ✘
MC1109 — methanogenic archaea 16S Methanococcus spp. ✔ ✘
Mcd77 S-G-gMcd-0077-a-A-21 methylotrophic bacteria 16S Methylocaldum spp. ✘ ✘
Mcell-1026 — methylotrophic bacteria 16S Methylocella palustris ✘ ✘
Mcell-181(AcidM-181) — methylotrophic bacteria 16S Methylocella palustris+Methylocapsa acidiphila ✘ ✘
MG1200 — methanogenic archaea 16S Methanomicrobium spp., Methanogenium spp., Methanoculleus spp., Methanospirillum spp., Methanocorpusculum spp., Methanoplanus spp. ✘ ✘
MG3 — methanogenic archaea, iron- and manganese-reducing bacteria 16S all methanogens, Halobacterium spp., Pyrococcus spp., Sulfolobus spp., Homo sapiens, Thermofilum spp., Pyrobaculum spp. ✘ ✘
MICR#1 — - 16S Microcystis spp. ✘ ✘
MICR#2 — - 16S Microcystis aeruginosa NIVA-CYA 143, 57, 228/1, 43, 123/1, 31, 166, M. cf. ichthyoblabe, NIVA-CYA 279, M. cf. wesenbergii NIVA-CYA 172/5, M. viridis NIVA-CYA 122/2 ✘ ✘
MICR#3 — - 16S Microcystis spp. ✘ ✘
Mlb482 S-G-gMlb-0482-a-A-23 methylotrophic bacteria 16S Methylobacter spp. ✘ ✘
Mlb662 S-G-gMlb-0662-a-A-22 methylotrophic bacteria 16S Methylobacter spp. ✘ ✘