List of probes and primers

2970 probes found.

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Probe name Full name (Alm et al.) Category Target rRNA Specificity FISH Primer
NOSTOC - 16S genera Nostoc, Aphanizomenon, and Anabaena
Nscoc128 S-*-Nscoc-128-a-A-18 bacteria of relevance in wastewater treatment, ammonia-oxidizing bacteria 16S Nitrosococcus oceani, N. halophilus (Gammaproteobacteria)
Nse1472 S-*-Nse-1472-a-A-18 bacteria of relevance in wastewater treatment, ammonia-oxidizing bacteria 16S Nitrosomonas europea, N. halophila, N. eutropha, Kraftisried-Isolat Nm103
Nsm156 S-G-Nsm-0155-a-A-19 bacteria of relevance in wastewater treatment, ammonia-oxidizing bacteria 16S Nitrosomonas spp., Nitrosococcus mobilis
Nso1225 S-F-bAOB-1224-a-A-20 bacteria of relevance in wastewater treatment, ammonia-oxidizing bacteria 16S Betaproteobacterial ammonia-oxidizing bacteria
Nso190 S-F-bAOB-0189-a-A-19 bacteria of relevance in wastewater treatment, ammonia-oxidizing bacteria 16S Betaproteobacterial ammonia-oxidizing bacteria
Nsv443 bacteria of relevance in wastewater treatment, ammonia-oxidizing bacteria 16S Nitrosospira spp.
Ntcoc84 S-*-Ntcoc-84-a-A-18 bacteria of relevance in wastewater treatment, nitrite-oxidizing bacteria 16S Nitrococcus mobilis
Ntspa1026 S-*-Ntspa-1026-a-A-18 bacteria of relevance in wastewater treatment, nitrite-oxidizing bacteria 16S Nitrospira moscoviensis, activated sludge clones A4 and A11
Ntspa662 S-G-Ntspa-662-a-A-18 bacteria of relevance in wastewater treatment, nitrite-oxidizing bacteria 16S genus Nitrospira
Ntspa712 S-*-Ntspa-712-a-A-21 higher taxonomic levels, nitrite-oxidizing bacteria 16S most members of the phylum Nitrospirae
Ntspn693 S-*-Ntspn-693-a-A-20 bacteria of relevance in wastewater treatment, nitrite-oxidizing bacteria 16S Nitrospina gracilis
OTU1-1415 S-*-OTU1-1415-a-A-20 bacteria of relevance in wastewater treatment 16S Zoogloea ramigera, activated sludge clones A16, H7, H10, H11, H13, H22, H27. H40, S21
OTU14-129 S-*-OTU14-0129-a-A-20 bacteria of relevance in wastewater treatment 16S Hyphomicrobium spp., activated sludge clones A7b, A39
OTU16-1027 S-*-OTU16-1027-a-A-18 bacteria of relevance in wastewater treatment 16S activated sludge clones H4, H6, H29, S7
OTU16-1350 S-*-OTU16-1350-a-A-18 bacteria of relevance in wastewater treatment 16S activated sludge clones H4, H6, H29, S7
OTU17-66 S-*-OTU17-0066-a-A-20 bacteria of relevance in wastewater treatment 16S activated sludge clones H46, S43
OTU2-132 (ATDe132) S-*-ATDe-0132-a-A-18 bacteria of relevance in wastewater treatment 16S Activated sludge clones A33, H25, H30, H35, S3, S10, and S23 of the Azoarcus-Thauera-Denitromonas lineage
OTU2-467 S-*-OTU2-0467-a-A-20 bacteria of relevance in wastewater treatment 16S activated sludge clones A33, H25, H30, H35, S3, S10, S23
OTU25to31-1406 S-*-OTU25to31-1406-a-A-18 bacteria of relevance in wastewater treatment, higher taxonomic levels 16S some Anaerolineae
OTU26-650 S-*-OTU26-0650-a-A-18 bacteria of relevance in wastewater treatment 16S activated sludge clones A11b, A30, H1, H19
OTU28-1346 S-*-OTU28-1346-a-A-18 bacteria of relevance in wastewater treatment 16S activated sludge clones H39, S41
STEBA1426 S-*-Steba-1426-a-A-18 bacteria of relevance in wastewater treatment 16S Some members of the Sterolibacterium lineage
OTU31-656 S-*-OTU31-0656-a-A-18 bacteria of relevance in wastewater treatment 16S activated sludge clones H8, S9
OTU32-208 S-*-OTU32-0208-a-A-18 bacteria of relevance in wastewater treatment 16S activated sludge clones A31, S47