2970 probes found.
Probe name | Full name (Alm et al.) | Category | Target rRNA | Specificity | FISH | Primer |
---|---|---|---|---|---|---|
EUB338_V | S-D-Bact-0338-a-A-18 | - | 16S | Candidatus Cyrtobacter comes some Chloroflexi some Firmicutes some Proteobacteria | ✘ | ✘ |
LS_HOL189 | L-P-Acido-0189-a-A-18 | - | 23S | Acidobacteria | ✔ | ✘ |
SS_HOL1400 | S-P-Acido-1400-a-A-17 | - | 16S | Acidobacteria | ✔ | ✘ |
LS_ALP544 | L-*-kan1–0544-a-A-18 | - | 23S | LS_LKC21_kan1 | ✔ | ✘ |
LS_ALP761 | L-*-Sub7–0761-a-A-18 | - | 23S | Parts of Acidobacterial subgroup 7 (including LS_LKC21_kan1, DON29, DON30, DON31) | ✔ | ✘ |
SS_subd7_UB55–585 | S-*-Sub7–0585-a-A-18 | - | 16S | Clone SS_LKC22_UB55, subgroup 7 SS_LKC22_UA71, SS_LKC21_kan1 | ✔ | ✘ |
SS_subd7_UB55–632 | S-*-Sub7–0632-a-A-18 | - | 16S | Clone SS_LKC22_UB55, subgroup 7 SS_LKC22_UA71, SS_LKC21_kan1 | ✔ | ✘ |
LS_subd8_SGB1223 | L-*-Sub8–1223-a-A-18 | - | 23S | Acidobacterial subgroup 8 LS_LKC11_kan2, LS_LKC22_kan3, LS_LKC11_kan4, LS_LKC21_kan5 (LS_LKC11_kan6), clone ZC6, G. fermentans, H. foetida | ✔ | ✘ |
LS_subd8_SGB1420 | L-*-Sub8-1420-a-A-18 | - | 23S | Acidobacterial subgroup 8 LS_LKC11_kan2, LS_LKC22_kan3, LS_LKC11_kan4, LS_LKC21_kan5, LS_LKC11_kan6, clone ZC6, G. fermentans, H. foetida, | ✔ | ✘ |
LS_GFER2787 | L-*-Gfer-2787-a-A-18 | - | 23S | G. fermentans and relatives (no LKC clones) | ✔ | ✘ |
Bru-996 | — | - | 16S | Brucella spp. | ✘ | ✘ |
S-S-T.int-0442-a-A-18 | — | - | 16S | Thiomonas intermedia | ✔ | ✘ |
S-S-T.plum-450-a-A-18 | — | - | 16S | Thiobacillus plumbophilus | ✔ | ✘ |
S-S-H.neap-635-a-A-19 | — | - | 16S | Halothiobacillus neapolitanus | ✔ | ✘ |
RB454 | — | - | 16S | Pirellula sp. strain SH1 | ✔ | ✘ |
PIR1223 | — | - | 16S | Genus Pirellula | ✔ | ✘ |
ALF682 | S-Sc-aProt-0682-a-A-18 | - | 16S | Alphaproteobacteria from sludge anaerobic digesters | ✘ | ✘ |
YDC69 | — | - | 16S | uncultivated magnetotactic cocci (Candidatus Magnetococcus yuandaducum) | ✔ | ✘ |
L2CG353 | — | - | 23S | Leptospirillum ferriphilum 5-way CG | ✔ | ✘ |
L2UBA353 | — | - | 23S | Leptospirillum rubarum UBA | ✔ | ✘ |
BDE525 | — | - | 16S | Genus Bdellovibrio | ✔ | ✘ |
Aceto2 | — | - | 16S | Acetobacteraceae (excepted Acidiphilium, Acidocella, Acidisphaera, Paracraurococcus, Crauroccocus, Roseococcus) | ✘ | ✘ |
Aceto3A | — | - | 16S | Some Acetobacteraceae | ✘ | ✘ |
Aceto3B | — | - | 16S | Acetobacteraceae | ✘ | ✘ |
Ace2 | — | - | 16S | Acetobacter | ✘ | ✘ |