List of probes and primers

2970 probes found.

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Probe name Full name (Alm et al.) Category Target rRNA Specificity FISH Primer
Rs-N31-197 S-S-RsN31-0197-a-A-18 - 16S specific for phylotype Rs-N31 (e.g. Can. Desulfovibrio trichonymphae) ✘ ✘
ZnDsv-02-471 S-S-ZnDv2-0471-a-A-18 - 16S specific for phylotype ZnDsv-02 in genus Desulfovibrio ✘ ✘
SUL90 S-*-Sul-0090-a-A-18 - 16S Subgroup of Epsilonproteobacteria (Uncultured Helicobacteraceae, Clone GD17b, Clone GD17a) ✘ ✘
Symco2 — - 16S endosymbiont of Codakia orbicularis ✘ ✘
GNS934 — - 16S Chloroflexi sponge cluster I ✔ ✘
POR1130 — - 16S Candidate phylum “Poribacteria” ✔ ✘
POR389 — - 16S Candidate phylum “Poribacteria” ✔ ✘
POR600 — - 16S Candidate phylum “Poribacteria” ✔ ✘
DSV119 — - 16S Desulfovibrio strain L3 ✔ ✘
DSV139 — - 16S Desulfovibrio strain L7 ✔ ✘
APC987 — - 18S novel eukaryotic phyla, APC ✔ ✘
HLB1074 — - 18S Heterolobosea ✔ ✘
VAH1044 — - 18S Vahlkampfiidae ✔ ✘
NAE1041 — - 18S Naegleria spp. ✔ ✘
Ccat — - 26S Candida catenulata ✔ ✘
Cint — - 26S Candida intermedia ✔ ✘
Geo — - 26S Geotrichum sp. ✔ ✘
Ylip — - 26S Yarrowia lipolytica ✔ ✘
DF198 S-*Bact-0198-a-A-20 - 16S Defluviicoccus related organisms, cluster III ✔ ✘
DF1004 S-*-Bact-1004-a-A-18 - 16S Defluviicoccus related organisms, some cluster III ✔ ✘
DF1013 S-*Bact-0198-a-A-20 - 16S Defluviicoccus related organisms. some cluster III ✔ ✘
DF181A S-*-Bact-0181-a-A-20 - 16S Defluviicoccus vanus related organisms, some cluster IV ✔ ✘
DF181B S-*-Bact-0181-b-A-18 - 16S Defluviicoccus related organisms, some cluster IV ✔ ✘
Ana_434 S-G-Bact-0434-a-A-21 - 16S Candidatus Anadelfobacter veles ✘ ✘
Cyrt_1438 S-G-Cyrt-1438-a-A-18 - 16S Candidatus Cyrtobacter comes ✘ ✘