List of probes and primers

2970 probes found.

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Probe name Full name (Alm et al.) Category Target rRNA Specificity FISH Primer
actino-1011 S-S-HGC-1011-a-A-19 bacteria of relevance in wastewater treatment 16S Tetrasphaera japonica, enhanced biological phosphorus removal clone Ebpr19, Ebpr20 (Actinobacteria) ✔ ✘
NSR826 — bacteria of relevance in wastewater treatment, nitrite-oxidizing bacteria 16S Nitrospira moscoviensis, freshwater Nitrospira spp. ✔ ✘
NSR1156 — bacteria of relevance in wastewater treatment, nitrite-oxidizing bacteria 16S Nitrospira moscoviensis, freshwater Nitrospira spp. ✔ ✘
NSR447 — bacteria of relevance in wastewater treatment, nitrite-oxidizing bacteria 16S Nitrospira spp. ✔ ✘
MNP1 — bacteria of relevance in wastewater treatment 16S nocardioform actinomycetes ✔ ✘
MLP — bacteria of relevance in wastewater treatment 16S Mycobacterium sp. SMKN23, Mycobacterium sp. SMKN22, (nocardioform actinomycetes) ✔ ✘
DLP — bacteria of relevance in wastewater treatment 16S nocardioform actinomycete sp. ✔ ✘
GLP1 — bacteria of relevance in wastewater treatment 16S Gordona sp. SMKN27, Gordona sp. SMKN12, Gordona sp. SMKN17, Gordona sp. SMKN14, (nocardioform actinomycetes) ✔ ✘
GLP2 — bacteria of relevance in wastewater treatment 16S Gordona sp. SMKN29, Gordona sp. SMKN15, (nocardioform actinomycetes) ✔ ✘
GLP3 — bacteria of relevance in wastewater treatment 16S nocardioform actinomycete sp. ✔ ✘
E.bar1237 S-S-E.bar-1237-a-A-18 animal and human associated microbiota, intestinal microbiota 16S Eubacterium barkeri ✔ ✘
E.bif462 S-S-E.bif-0462-a-A-18 animal and human associated microbiota, intestinal microbiota 16S Eubacterium biforme ✔ ✘
E.con1122 S-S-E.con-1122-a-A-20 animal and human associated microbiota, intestinal microbiota 16S Eubacterium contortum ✔ ✘
E.cyl461 S-St-E.cyl-0461-a-A-18 animal and human associated microbiota, intestinal microbiota 16S Eubacterium cylindroides ✔ ✘
E.cyl466 S-St-E.cyl-0466-a-A-18- animal and human associated microbiota, intestinal microbiota 16S Eubacterium cylindroides ✔ ✘
E.dol183 S-S-E.dol-0183-a-A-18 animal and human associated microbiota, intestinal microbiota 16S Eubacterium dolichum ✔ ✘
E.had579 S-S-E.had-0579-a-A-20 animal and human associated microbiota, intestinal microbiota 16S Eubacterium hadrum (Anaerostipes hadrus) ✔ ✘
E.len194 S-S-E.len-0194-a-A-18 animal and human associated microbiota, intestinal microbiota 16S Eubacterium lentum ✔ ✘
E.lim1433 S-S-E.lim-1433-a-A-18 animal and human associated microbiota, intestinal microbiota 16S Eubacterium limosum E. callanderi ✔ ✘
E.mon84 S-S-E.mon-0084-a-A-18 animal and human associated microbiota, intestinal microbiota 16S Eubacterium moniliforme ✔ ✘
E.ven66 S-S-E.ven-0066-a-A-18 animal and human associated microbiota, intestinal microbiota 16S Eubacterium ventriosum ✔ ✘
GSB-532 S-F-GSB-532-a-A-15 phototrophic bacteria, higher taxonomic levels 16S green sulfur bacteria, Chlorobiaceae ✔ ✘
GSB-822 S-F-GSB-822-a-A-19 phototrophic bacteria, higher taxonomic levels 16S green sulfur bacteria, Chlorobiaceae ✔ ✘
b-AO233 — bacteria of relevance in wastewater treatment, ammonia-oxidizing bacteria 16S Betaproteobacterial ammonia-oxidizing bacteria ✘ ✘
Nsp436 — bacteria of relevance in wastewater treatment, ammonia-oxidizing bacteria 16S Nitrosospira spp. ✘ ✘