List of probes and primers

2970 probes found.

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Probe name Full name (Alm et al.) Category Target rRNA Specificity FISH Primer
TSOC — bacteria of medical or hygienical relevance 16S Treponema socranskii ✘ ✘
Ttoga660 S-*-Ttoga-0660-a-A-18 higher taxonomic levels, iron- and manganese-reducing bacteria 16S Thermotogales ✔ ✘
TVIN — bacteria of medical or hygienical relevance 16S Treponema vincentii ✘ ✘
UNIV1390 S-*-Univ-1390-a-A-18 higher taxonomic levels 16S all Organisms ✔ ✘
UNIVER — higher taxonomic levels 16S all Bacteria ✘ ✘
XAN818 — - 16S Xanthomonas branch ✔ ✘
ZAL — bacteria of relevance in wastewater treatment 16S Zoogloea ramigera ATCC 19623 ✔ ✘
ZBE — bacteria of relevance in wastewater treatment 16S Zoogloea ramigera ATCC 25935 ✔ ✘
ZRA23a (ZRA,ZOGLO647) S-*-Zoglo-0647-a-A-18 bacteria of relevance in wastewater treatment 16S Most members of the Zoogloea lineage, not Z. resiniphila ✔ ✘
CC23a — symbiotic microbes 16S Caedibacter caryophilus (C. caryophyla) and other Caedibacter-related endosymbionts of Acanthamoeba spp. ✘ ✘
PcaeC9 S-S-PcaeC9-217-a-A-18 symbiotic microbes 16S Candidatus Paracaedibacter acanthamoebae (endosymbiont of Acanthamoeba sp. UWC9) ✔ ✘
PcaeE39 S-S-PcaeE339-217-a-A-18 symbiotic microbes 16S Candidatus Paracaedibacter symbiosus (endosymbiont of Acanthamoeba sp. UWE39) ✔ ✘
CaeAc998 S-S-CaeAc-998-a-A-18 symbiotic microbes 16S Candidatus Caedibacter acanthamoebae (endosymbiont of Acanthamoeba polyphaga HN-3) ✔ ✘
Mg705 — methylotrophic bacteria 16S type I methanotrophs ✔ ✘
Mg84 — methylotrophic bacteria 16S type I methanotrophs ✔ ✘
Ma450 — methylotrophic bacteria 16S type II methanotrophs (Methylosinus/Methylocystis spp.) ✔ ✘
Ma464 — methylotrophic bacteria 16S type II methanotrophs ✔ ✘
Mg669 — methylotrophic bacteria 16S Methylobacter spp., Methylomonas spp. ✔ ✘
Mg1004 — methylotrophic bacteria 16S Methylomicrobium ✔ ✘
Mg983 — methylotrophic bacteria 16S type I methanotrophs ✘ ✘
Mg993 — methylotrophic bacteria 16S type I methanotrophs ✘ ✘
Stemal — bacteria of medical or hygienical relevance 16S Stenotrophomonas maltophilia ✔ ✘
Burcep — bacteria of medical or hygienical relevance 16S Burkholderia cepacia ✔ ✘
Burkho — bacteria of medical or hygienical relevance 16S Burkholderia spp. ✔ ✘
Haeinf — bacteria of medical or hygienical relevance 16S Haemophilus influenzae ✔ ✘