Probe details

G123T

Tested for in situ hybridization.

Accession no. pB-170
Full name (Alm et al.) S-G-Thioth-697-a-A-18
Categories bacteria of relevance in wastewater treatment
S-oxidizing (sulfur-oxidizing) bacteria
Specificity Thiothrix eikelboomii, T. nivea, T. unzii, T. fructosivorans, T. defluvii, Eikelboom type 021N group I, II, III
Taxonomy Thiothrix; Thiotrichaceae; Thiotrichales; Gammaproteobacteria; Pseudomonadota; Pseudomonadati; Bacteria; cellular organisms
Sequence 5'-CCT TCC GAT CTC TAT GCA-3'
Length [nt] 18
G+C content [%] 50
Target rRNA 16S
Position 697-714
Formamide 40
Check specificity/coverage SILVA TestProbe
References Phylogenetic analysis of and oligonucleotide probe development for eikelboom type 021N filamentous bacteria isolated from bulking activated sludge. Kanagawa T, Kamagata Y, Aruga S, Kohno T, Horn M, Wagner M. Applied and environmental microbiology. 2000. Pubmed: 11055962
Remarks -