List of probes and primers

2970 probes found.

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Probe name Full name (Alm et al.) Category Target rRNA Specificity FISH Primer
Lfer66 — animal and human associated microbiota, intestinal microbiota 16S Lactobacillus fermentum ✘ ✘
Tbm1282 S-G-Tbm-1282-a-A-18 extremophilic microbes 16S most of Thermoanaerobacterium sp. ✔ ✘
gam1-1246 — animal and human associated microbiota, intestinal microbiota 16S “Candidatus Gilliamella apicola” or Gamma-1 (symbiotic Gammaproteobacteria phylotype in honey bee) ✔ ✘
RHGA702 S-S-Nsgar-702-a-A-18 extremophilic microbes 16S “Candidatus Nitrososphaera gargensis” ✔ ✘
Cps-1414 S-S-Cps-1414-a-A-18 bacteria of medical or hygienical relevance 16S “Chlamydophila psittaci” group including C. felis, C. abortus, and C. caviae ✔ ✘
Cps-1353 S-S-Cps-1353-a-A-18 bacteria of medical or hygienical relevance 16S “Chlamydophila psittaci” group including C. felis, C. abortus, and C. caviae ✔ ✘
CPla-1 — animal and human associated microbiota, intestinal microbiota 16S „Termite planctomycete cluster 1“ ✔ ✘
CPla-2 — animal and human associated microbiota, intestinal microbiota 16S „Termite planctomycete cluster 2“ ✔ ✘
CPla-3 — animal and human associated microbiota, intestinal microbiota 16S „Termite planctomycete cluster 2“ ✔ ✘
Tet3-654 S-S-Tet3-654-a-A-18 - 16S 3 Uncultured Tetrasphaera ✔ ✘
Usporo489 — - 16S a group of unclassified Clostridiales related to Sporobacter ✘ ✘
Am445 S-F-aMtr-0445-a-A-28 methylotrophic bacteria 16S a-Methanotrophs ✘ ✘
Am976 S-F-aMtr-0976-a-A-20 methylotrophic bacteria 16S a-Methanotrophs ✘ ✘
SymAf576 — - 16S A. fragilis symbiont ✔ ✘
SymAf1272 — - 16S A. fragilis symbiont ✔ ✘
DEN124 — denitrifying (nitrate-reducing) bacteria, bacteria of relevance in wastewater treatment 16S Acetate-denitrifying cluster ✔ ✘
DEN581 — denitrifying (nitrate-reducing) bacteria, bacteria of relevance in wastewater treatment 16S Acetate-denitrifying cluster ✔ ✘
DEN444 — - 16S Acetate-denitrifying cluster ✔ ✘
DEN1454 — - 16S Acetate-denitrifying cluster ✔ ✘
DEN220 — - 16S Acetate-denitrifying cluster and some members of the Comamonadaceae family ✔ ✘
DEN220a — - 16S Acetate-denitrifying cluster and some members of the Rhodocyclaceae family ✔ ✘
DEN441 — - 16S Acetate-denitrifying cluster and some members of the Rhodocyclaceae family ✔ ✘
Ace2 — - 16S Acetobacter ✘ ✘
Aceti1 — - 16S Acetobacter aceti ✘ ✘
Aceto3B — - 16S Acetobacteraceae ✘ ✘