List of probes and primers

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Entered target organism: Zoogloea.

18 probes found.

Hit type Probe name Full name (Alm et al.) Target rRNA Specificity FISH Primer
Exact ZOGLO828 S-*-Zoglo-0828-a-A-18 16S Zoogloea spp.
Exact ZOGLO1416 S-G-Zoglo-1416-a-A-18 16S Zoogloea spp.
Exact ZOGLO455 S-*-Zoglo-0455-a-A-18 16S Some members of the Zoogloea lineage (activated sludge clones H13, H11, H22, H10, H40, H27, and S21), not Z. ramigera and Z. resiniphila
Exact ZRA23a (ZRA,ZOGLO647) S-*-Zoglo-0647-a-A-18 16S Most members of the Zoogloea lineage, not Z. resiniphila
Spec OTU1-1415 S-*-OTU1-1415-a-A-20 16S Zoogloea ramigera, activated sludge clones A16, H7, H10, H11, H13, H22, H27. H40, S21
Spec ZAL 16S Zoogloea ramigera ATCC 19623
Spec ZBE 16S Zoogloea ramigera ATCC 25935
Spec ZRA23a (ZRA,ZOGLO647) S-*-Zoglo-0647-a-A-18 16S Most members of the Zoogloea lineage, not Z. resiniphila
Spec RHC630 S-*-RHC-0630-a-A-18 16S Most Thauera, Zoogloea, and Rhodocyclus spp.
Spec RHC143 S-*-RHC-0143-a-A-18 16S Most members of the Dechloromonas-Ferribacterium-Quadricoccus-Azonexus, the Azospira, and the Rhodocyclus-Propionivibrio-Accumulibacter lineages, Zoogloea spp., and few members of the Azoarcus-Thauera-Denitromonas lineage
Spec ZOGLO828 S-*-Zoglo-0828-a-A-18 16S Zoogloea spp.
Spec ZOGLO455 S-*-Zoglo-0455-a-A-18 16S Some members of the Zoogloea lineage (activated sludge clones H13, H11, H22, H10, H40, H27, and S21), not Z. ramigera and Z. resiniphila
Spec ZORAM211 S-*-Zo.ram-0211-a-A-18 16S Zoogloea ramigera
Spec ZORAM441 S-*-Zo.ram-0441-a-A-18 16S Zoogloea ramigera
Spec BTWO663 S-*-Btwo-0663-a-A-18 16S most Rhodocyclales, but not the Rhodocyclales environmental cluster 1, Zoogloea spp., and Dechlorosoma-Azospira cluster
Spec TH3 (AZTHA222,RHC222) S-*-RHC-0222-a-A-18 16S Some members of the Azoarcus-Thauera-Denitromonas, Zoogloea, and Azovibrio lineages
Spec TH14 (RHC175b) S-*-RHC-0175-b-A-18 16S Some Thauera, Azoarcus, Zoogloea, Sterolibacterium, and Azovibrio spp.
Spec ZOGLO1416 S-G-Zoglo-1416-a-A-18 16S Zoogloea spp.