List of probes and primers

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Entered target organism: Zoogloea.

18 probes found.

Hit type Probe name Full name (Alm et al.) Target rRNA Specificity FISH Primer
Exact ZOGLO828 S-*-Zoglo-0828-a-A-18 16S Zoogloea spp. ✘ ✘
Exact ZOGLO1416 S-G-Zoglo-1416-a-A-18 16S Zoogloea spp. ✘ ✘
Exact ZOGLO455 S-*-Zoglo-0455-a-A-18 16S Some members of the Zoogloea lineage (activated sludge clones H13, H11, H22, H10, H40, H27, and S21), not Z. ramigera and Z. resiniphila ✘ ✘
Exact ZRA23a (ZRA,ZOGLO647) S-*-Zoglo-0647-a-A-18 16S Most members of the Zoogloea lineage, not Z. resiniphila ✔ ✘
Spec OTU1-1415 S-*-OTU1-1415-a-A-20 16S Zoogloea ramigera, activated sludge clones A16, H7, H10, H11, H13, H22, H27. H40, S21 ✔ ✘
Spec ZAL — 16S Zoogloea ramigera ATCC 19623 ✔ ✘
Spec ZBE — 16S Zoogloea ramigera ATCC 25935 ✔ ✘
Spec ZRA23a (ZRA,ZOGLO647) S-*-Zoglo-0647-a-A-18 16S Most members of the Zoogloea lineage, not Z. resiniphila ✔ ✘
Spec RHC630 S-*-RHC-0630-a-A-18 16S Most Thauera, Zoogloea, and Rhodocyclus spp. ✘ ✘
Spec RHC143 S-*-RHC-0143-a-A-18 16S Most members of the Dechloromonas-Ferribacterium-Quadricoccus-Azonexus, the Azospira, and the Rhodocyclus-Propionivibrio-Accumulibacter lineages, Zoogloea spp., and few members of the Azoarcus-Thauera-Denitromonas lineage ✘ ✘
Spec ZOGLO828 S-*-Zoglo-0828-a-A-18 16S Zoogloea spp. ✘ ✘
Spec ZOGLO455 S-*-Zoglo-0455-a-A-18 16S Some members of the Zoogloea lineage (activated sludge clones H13, H11, H22, H10, H40, H27, and S21), not Z. ramigera and Z. resiniphila ✘ ✘
Spec ZORAM211 S-*-Zo.ram-0211-a-A-18 16S Zoogloea ramigera ✘ ✘
Spec ZORAM441 S-*-Zo.ram-0441-a-A-18 16S Zoogloea ramigera ✘ ✘
Spec BTWO663 S-*-Btwo-0663-a-A-18 16S most Rhodocyclales, but not the Rhodocyclales environmental cluster 1, Zoogloea spp., and Dechlorosoma-Azospira cluster ✘ ✘
Spec TH3 (AZTHA222,RHC222) S-*-RHC-0222-a-A-18 16S Some members of the Azoarcus-Thauera-Denitromonas, Zoogloea, and Azovibrio lineages ✘ ✘
Spec TH14 (RHC175b) S-*-RHC-0175-b-A-18 16S Some Thauera, Azoarcus, Zoogloea, Sterolibacterium, and Azovibrio spp. ✘ ✘
Spec ZOGLO1416 S-G-Zoglo-1416-a-A-18 16S Zoogloea spp. ✘ ✘