List of probes and primers

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Entered target organism: Vibrio.

78 probes found.

Hit type Probe name Full name (Alm et al.) Target rRNA Specificity FISH Primer
Exact VIB572a 16S Genus Vibrio
Exact KO 232 S-*-Vchol-0122-a-A-18 16S Vibrio cholerae, V. mimicus
Exact G V 16S Vibrio
Spec DSBO224 16S Desulfobotulus sapovorans, Desulfovibrio fairfieldensis, and other Deltaproteobacteria
Spec DSD131 (DSVAE131) S-S-Dsv.ae-0131-a-A-18 16S Desulfovibrio aestuarii
Spec DSV1154 16S Desulfovibrio alcoholivorans, D. fructosivorans, D. burkinensis, rice field isolate F1-7b and R-SucA1
Spec DSV1292 S-*-Dsv-1292-a-A-18 16S Some Desulfovibrio and Bilophila wadsworthia
Spec DSV407 16S Few Desulfovibrionaceae, Desulfohalobiaceae, and Desulfonatronumaceae
Spec Dsv683 S-*-Dsv-0683-a-A-22 16S Desulfovibrionaceae, metal reducers
Spec 687(DSV687) S-F-Dsv-0687-a-A-16 16S Most Desulfovibrionales (excluding Lawsonia) and many Desulfuromonales
Spec DSV698 16S Some Desulfovibrio, Bilophila wadsworthia, and Lawsonia intracellularis
Spec SRB385 (SRB) S-*-Srb-0385-a-A-18 16S Most Desulfovibrionales and other Bacteria
Spec VaV3 16S Vibrio anguillarum
Spec V3VV 16S Vibrio vulnificus
Spec NTSPA714 S-*-Ntspa-714-a-A-18 16S Phylum Nitrospira, not Thermodesulfovibrio islandicus
Spec DSB623a S-*-Dsb-0623-a-A-18 16S Desulfobacter curvatus, Dsb. halotolerans, Dsb. hydrogenophilus, Dsb. postgatei, Dsb. Vibrioformis
Spec DSV686 S-*-Dsv-0686-a-A-18 16S Most Desulfovibrionales and Desulfuromonadales
Spec DSV698 S-*-Dsv-0698-a-A-18 16S Desulfovibrio caledoniensis, Dsv. dechloracetivorans, Dsv. profundus, Dsv. aespoeensis, Dsv. halophilus, Dsv. gracilis, Dsv. longus, Dsv. salexigens, Dsv. zosterae, Dsv. bastinii, Dsv. fairfieldensis, Dsv. intestinalis, Dsv. piger, Dsv. desulfuricans, Dsv
Spec DVDAPC872 S-*-Dv.d.a.p.c-0872-a-A-18 16S Desulfovibrio caledoniensis, Dsv. dechloracetivorans, Dsv. profundus, Dsv.aespoeensis
Spec DVHO130 S-*-Dv.h.o-0130-a-A-18 16S Desulfovibrio halophilus, Dsv. oxyclinae
Spec DVHO733 S-*-Dv.h.o-0733-a-A-18 16S Desulfovibrio halophilus, Dsv. oxyclinae
Spec DVHO831 S-*-Dv.h.o-0831-a-A-18 16S Desulfovibrio halophilus, Dsv. oxyclinae
Spec DVHO1424 S-*-Dv.h.o-1424-a-A-18 16S Desulfovibrio halophilus, Dsv. oxyclinae
Spec DVAA1111 S-*-Dv.a.a-1111-a-A-18 16S Desulfovibrio africanus, Dsv. aminophilus
Spec DVGL199 S-*-Dv.g.l-0199-a-A-18 16S Desulfovibrio gracilis, Dsv. longus