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Entered target organism: Clostridium.
38 probes found.
| Hit type | Probe name | Full name (Alm et al.) | Target rRNA | Specificity | FISH | Primer |
|---|---|---|---|---|---|---|
| Exact | Clost | — | 16S | Clostridium | ✘ | ✘ |
| Exact | Chis150 | S-*-Chis-0150-a-A-23 | 16S | most of the Clostridium histolyticum group (Clostridium cluster I and II) | ✔ | ✘ |
| Exact | Chis150 | S-*-Chis-0150-a-A-23 | 16S | most of the Clostridium histolyticum group (Clostridium cluster I and II) | ✔ | ✘ |
| Exact | KO 226 | S-*-Cbut-0183-a-A-21 | 16S | Clostridium butyricum, C. kainantoi | ✘ | ✘ |
| Exact | CUE1240 | — | 16S | Group 3 clones (AC014 and AC036), closely related to Clostridium sp. strain XB90 | ✔ | ✘ |
| Spec | Clept1240 | S-G-Clept-1240-a-A-18 | 16S | Clostridium leptum | ✘ | ✘ |
| Spec | Ehal1469 | — | 16S | Eubacterium hallii, Clostridium herbivorans, Clostridium polysaccharolyticum | ✔ | ✘ |
| Spec | Ecyl387 | — | 16S | Eubacterium cylindroides, Clostridium innocuum, Eubacterium biforme, Eubacterium tortuosum, Eubacterium dolichum, Streptococcus pleomorphus | ✔ | ✘ |
| Spec | Rbro730 | S-*-Rbro-0730-a-A-18 | 16S | Clostridium sporosphaeroides, Ruminococcus bromii, Clostridium leptum | ✔ | ✘ |
| Spec | CC-1 | — | 16S | Clostridium clostridiiforme ATCC 29084 GenBank no. (GI) 174147 | ✘ | ✘ |
| Spec | CC-2 | — | 16S | Clostridium clostridiiforme ATCC 29084 GenBank no. (GI) 174147 | ✘ | ✘ |
| Spec | CC-3 | — | 16S | Clostridium clostridiiforme ATCC 29084 GenBank no. (GI) 174147 | ✘ | ✘ |
| Spec | CL-1 | — | 16S | Clostridium leptum ATCC 29065 GenBank no. (GI) 12655400 | ✘ | ✘ |
| Spec | CL-2 | — | 16S | Clostridium leptum ATCC 29065 GenBank no. (GI) 12655400 | ✘ | ✘ |
| Spec | CL-3 | — | 16S | Clostridium leptum ATCC 29065 GenBank no. (GI) 12655400 | ✘ | ✘ |
| Spec | Cinn447 | S-S-Cinn-0447-a-A-18 | 16S | Clostridium innocum | ✘ | ✘ |
| Spec | Cp1 | — | 16S | Clostridium perfringens | ✘ | ✘ |
| Spec | Cp2 | — | 16S | Clostridium perfringens | ✘ | ✘ |
| Spec | Cp3 | — | 23S | Clostridium perfringens | ✘ | ✘ |
| Spec | Clit135 | S-*-Clit-0135-a-A-19 | 16S | some of the Clostridium lituseburense group (Clostridium cluster XI) | ✔ | ✘ |
| Spec | Chis150 | S-*-Chis-0150-a-A-23 | 16S | most of the Clostridium histolyticum group (Clostridium cluster I and II) | ✔ | ✘ |
| Spec | Erec482 | S-*-Erec-0482-a-A-19 | 16S | most of the Clostridium coccoides-Eubacterium rectale group (Clostridium cluster XIVa and XIVb) | ✔ | ✘ |
| Spec | Csac67 | S-S-Csac-67-a-A-20 | 16S | Clostridium saccharogumia | ✔ | ✘ |
| Spec | CST440 | — | 16S | Group 1 clones (AC044 and AC051), closely related to Clostridium stercorarium | ✔ | ✘ |
| Spec | CTH1258 | — | 16S | Group 2 clones (AC020 and AC033), closely related to Clostridium thermocellum | ✔ | ✘ |