List of probes and primers

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Entered target organism: Alphaproteobacteria.

32 probes found.

Hit type Probe name Full name (Alm et al.) Target rRNA Specificity FISH Primer
Exact prV2 16S uncultured alphaproteobacterium
Exact prV6 16S uncultured alphaproteobacterium
Exact prV8 16S uncultured alphaproteobacterium
Exact ALF73a 23S some Alphaproteobacteria
Exact ALF682 S-Sc-aProt-0682-a-A-18 16S Alphaproteobacteria from sludge anaerobic digesters
Exact ALF4-1322 16S alpha4-subgroup of Proteobacteria
Exact NAL1208 16S Nevskia clones NO2 and NO11, Mycoplana bullata, Brevundimonas diminuta
Exact E1e3 1150 S-*-Ualp-1150-a-A-18 16S some unclassified Alphaproteobacteria
Exact Ualp-1109 S-*-Ualp-1109-a-A-18 16S some unclassified Alphaproteobacteria
Exact AF310-128 16S Agrobacterium larrymoorei, some Sulfitobacter, and some Roseobacter
Exact ALF1B S-Sc-aProt-0019-a-A-17 16S Alphaproteobacteria, some Deltaproteobacteria, Spirochaetes
Exact ALF968 16S Alphaproteobacteria, except of Rickettsiales
Exact SBR9-1a S-D-s91a-0578-b-A-20 16S Alphaproteobacterial SBR9 clone 1 (AY254694)
Exact SBR9-1b S-D-s91a-0778-b-A-18 16S Alphaproteobacterial SBR9 clone 1 (AY254694)
Exact Nost993 S-*-Nost-993-a-A-18 16S Filamentous Alphaproteobacteria
Exact PPx1002 S-*-PPx-1002-a-A-18 16S Filamentous Alphaproteobacteria
Exact T28-1435 16S clone T28 and T29 of a subgroup within the Alphaproteobacteria
Exact PTB-all/646 16S Alphaproteobacterial clade (all PTB)
Spec ALF1B S-Sc-aProt-0019-a-A-17 16S Alphaproteobacteria, some Deltaproteobacteria, Spirochaetes
Spec ALF73a 23S some Alphaproteobacteria
Spec ALF968 16S Alphaproteobacteria, except of Rickettsiales
Spec PTB-all/646 16S Alphaproteobacterial clade (all PTB)
Spec T28-649 16S clone T28 and T29 of a subgroup within the Alphaproteobacteria, Sphingomonas capsulata
Spec T28-1435 16S clone T28 and T29 of a subgroup within the Alphaproteobacteria
Spec SBR9-1a S-D-s91a-0578-b-A-20 16S Alphaproteobacterial SBR9 clone 1 (AY254694)