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Entered target organism: Acidobacteriota.
17 probes found.
| Hit type | Probe name | Full name (Alm et al.) | Target rRNA | Specificity | FISH | Primer |
|---|---|---|---|---|---|---|
| Exact | LS_HOL189 | L-P-Acido-0189-a-A-18 | 23S | Acidobacteria | ✔ | ✘ |
| Exact | SS_HOL1400 | S-P-Acido-1400-a-A-17 | 16S | Acidobacteria | ✔ | ✘ |
| Exact | IRog1 | — | 16S | phylum Acidobacteria group a | ✘ | ✘ |
| Exact | IRog2 | — | 16S | phylum Acidobacteria group a | ✘ | ✘ |
| Exact | HoAc1402 | S-*-HoAc-1402-a-A-18 | 16S | Acidobacteria, activated sludge clones A22, A34, H3, H44, S6 | ✔ | ✘ |
| Exact | LS_ALP761 | L-*-Sub7–0761-a-A-18 | 23S | Parts of Acidobacterial subgroup 7 (including LS_LKC21_kan1, DON29, DON30, DON31) | ✔ | ✘ |
| Exact | RhizoLCSA2 | — | 16S | Maize rhizosphere clones affiliated to Acidobacteria (Acidobacteria_7 cluster) | ✘ | ✘ |
| Exact | RhizoLCSA3 | — | 16S | Maize rhizosphere clones affiliated to Acidobacteria (Acidobacteria_7 cluster) | ✘ | ✘ |
| Exact | RhizoLCSA4 | — | 16S | Maize rhizosphere clones affiliated to Acidobacteria (Acidobacteria_7 cluster) | ✘ | ✘ |
| Exact | AcidUnc | — | 16S | Uncultured Acidobacteria (Acidobacteria_6 cluster) | ✘ | ✘ |
| Exact | Acido-a | — | 16S | Uncultured Acidobacteria (Acidobacteria_6 cluster) | ✘ | ✘ |
| Exact | OTU43/44-360 | S-*-OTU43/44-0360-a-A-18 | 16S | Acidobacteria group a, activated sludge clones A22, A34, H3 | ✔ | ✘ |
| Exact | AcidoUnc3 | — | 16S | Uncultured Acidobacteria (Acidobacteria_4 cluster) | ✘ | ✘ |
| Exact | Acido-c | — | 16S | Uncultured Acidobacteria (Acidobacteria_4 cluster) | ✘ | ✘ |
| Exact | LS_subd8_SGB1223 | L-*-Sub8–1223-a-A-18 | 23S | Acidobacterial subgroup 8 LS_LKC11_kan2, LS_LKC22_kan3, LS_LKC11_kan4, LS_LKC21_kan5 (LS_LKC11_kan6), clone ZC6, G. fermentans, H. foetida | ✔ | ✘ |
| Exact | RhizoLCSA6 | — | 16S | Maize rhizosphere clones affiliated to Acidobacteria (Acidobacteria_6 cluster) | ✘ | ✘ |
| Exact | LS_subd8_SGB1420 | L-*-Sub8-1420-a-A-18 | 23S | Acidobacterial subgroup 8 LS_LKC11_kan2, LS_LKC22_kan3, LS_LKC11_kan4, LS_LKC21_kan5, LS_LKC11_kan6, clone ZC6, G. fermentans, H. foetida, | ✔ | ✘ |