List of probes and primers

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Entered target organism: Desulfovibrio.

83 probes found.

Hit type Probe name Full name (Alm et al.) Target rRNA Specificity FISH Primer
Exact DSV827 — 16S members of the genus Desulfovibrio ✔ ✘
Exact DVAA1111 S-*-Dv.a.a-1111-a-A-18 16S Desulfovibrio africanus, Dsv. aminophilus ✘ ✘
Exact DVDAPC872 S-*-Dv.d.a.p.c-0872-a-A-18 16S Desulfovibrio caledoniensis, Dsv. dechloracetivorans, Dsv. profundus, Dsv.aespoeensis ✘ ✘
Exact DSV445 — 16S Desulfovibrio strain EtOHK3 ✔ ✘
Exact DSV119 — 16S Desulfovibrio strain L3 ✔ ✘
Exact ZnDsv-02-471 S-S-ZnDv2-0471-a-A-18 16S specific for phylotype ZnDsv-02 in genus Desulfovibrio ✘ ✘
Exact DSV64 — 16S Desulfovibrio strain EtOHK2 ✔ ✘
Exact DSV139 — 16S Desulfovibrio strain L7 ✔ ✘
Exact Rs-N31-197 S-S-RsN31-0197-a-A-18 16S specific for phylotype Rs-N31 (e.g. Can. Desulfovibrio trichonymphae) ✘ ✘
Spec DSBO224 — 16S Desulfobotulus sapovorans, Desulfovibrio fairfieldensis, and other Deltaproteobacteria ✔ ✘
Spec DSD131 (DSVAE131) S-S-Dsv.ae-0131-a-A-18 16S Desulfovibrio aestuarii ✔ ✘
Spec DSV1154 — 16S Desulfovibrio alcoholivorans, D. fructosivorans, D. burkinensis, rice field isolate F1-7b and R-SucA1 ✘ ✘
Spec DSV1292 S-*-Dsv-1292-a-A-18 16S Some Desulfovibrio and Bilophila wadsworthia ✔ ✘
Spec DSV407 — 16S Few Desulfovibrionaceae, Desulfohalobiaceae, and Desulfonatronumaceae ✔ ✘
Spec Dsv683 S-*-Dsv-0683-a-A-22 16S Desulfovibrionaceae, metal reducers ✘ ✘
Spec 687(DSV687) S-F-Dsv-0687-a-A-16 16S Most Desulfovibrionales (excluding Lawsonia) and many Desulfuromonales ✔ ✘
Spec DSV698 — 16S Some Desulfovibrio, Bilophila wadsworthia, and Lawsonia intracellularis ✔ ✘
Spec SRB385 (SRB) S-*-Srb-0385-a-A-18 16S Most Desulfovibrionales and other Bacteria ✔ ✘
Spec NTSPA714 S-*-Ntspa-714-a-A-18 16S Phylum Nitrospira, not Thermodesulfovibrio islandicus ✘ ✘
Spec DSV686 S-*-Dsv-0686-a-A-18 16S Most Desulfovibrionales and Desulfuromonadales ✘ ✘
Spec DSV698 S-*-Dsv-0698-a-A-18 16S Desulfovibrio caledoniensis, Dsv. dechloracetivorans, Dsv. profundus, Dsv. aespoeensis, Dsv. halophilus, Dsv. gracilis, Dsv. longus, Dsv. salexigens, Dsv. zosterae, Dsv. bastinii, Dsv. fairfieldensis, Dsv. intestinalis, Dsv. piger, Dsv. desulfuricans, Dsv ✘ ✘
Spec DVDAPC872 S-*-Dv.d.a.p.c-0872-a-A-18 16S Desulfovibrio caledoniensis, Dsv. dechloracetivorans, Dsv. profundus, Dsv.aespoeensis ✘ ✘
Spec DVHO130 S-*-Dv.h.o-0130-a-A-18 16S Desulfovibrio halophilus, Dsv. oxyclinae ✘ ✘
Spec DVHO733 S-*-Dv.h.o-0733-a-A-18 16S Desulfovibrio halophilus, Dsv. oxyclinae ✘ ✘
Spec DVHO831 S-*-Dv.h.o-0831-a-A-18 16S Desulfovibrio halophilus, Dsv. oxyclinae ✘ ✘