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Entered target organism: Bacteria.
463 probes found.
| Hit type | Probe name | Full name (Alm et al.) | Target rRNA | Specificity | FISH | Primer |
|---|---|---|---|---|---|---|
| Spec | POR1130 | — | 16S | Candidate phylum “Poribacteria” | ✔ | ✘ |
| Spec | POR389 | — | 16S | Candidate phylum “Poribacteria” | ✔ | ✘ |
| Spec | POR600 | — | 16S | Candidate phylum “Poribacteria” | ✔ | ✘ |
| Spec | EUB338_V | S-D-Bact-0338-a-A-18 | 16S | Candidatus Cyrtobacter comes some Chloroflexi some Firmicutes some Proteobacteria | ✘ | ✘ |
| Spec | LS_HOL189 | L-P-Acido-0189-a-A-18 | 23S | Acidobacteria | ✔ | ✘ |
| Spec | SS_HOL1400 | S-P-Acido-1400-a-A-17 | 16S | Acidobacteria | ✔ | ✘ |
| Spec | LS_ALP761 | L-*-Sub7–0761-a-A-18 | 23S | Parts of Acidobacterial subgroup 7 (including LS_LKC21_kan1, DON29, DON30, DON31) | ✔ | ✘ |
| Spec | LS_subd8_SGB1223 | L-*-Sub8–1223-a-A-18 | 23S | Acidobacterial subgroup 8 LS_LKC11_kan2, LS_LKC22_kan3, LS_LKC11_kan4, LS_LKC21_kan5 (LS_LKC11_kan6), clone ZC6, G. fermentans, H. foetida | ✔ | ✘ |
| Spec | LS_subd8_SGB1420 | L-*-Sub8-1420-a-A-18 | 23S | Acidobacterial subgroup 8 LS_LKC11_kan2, LS_LKC22_kan3, LS_LKC11_kan4, LS_LKC21_kan5, LS_LKC11_kan6, clone ZC6, G. fermentans, H. foetida, | ✔ | ✘ |
| Spec | ALF682 | S-Sc-aProt-0682-a-A-18 | 16S | Alphaproteobacteria from sludge anaerobic digesters | ✘ | ✘ |
| Spec | Rzbc1247 | — | 16S | Rhizobiaceae, Brucellaceae, Bartonella, Phyllobacteriaceae, Blastochloris, Azospirillum irakense and A. amazonense | ✘ | ✘ |
| Spec | BET940 | — | 16S | Betaproteobacteria (excepted Comamonadaceae, Nitrosomonadaceae and Methylophilaceae) | ✘ | ✘ |
| Spec | Beta2 | — | 16S | Betaproteobacteria | ✘ | ✘ |
| Spec | Beta3 | — | 16S | Betaproteobacteria | ✘ | ✘ |
| Spec | Ep1 | — | 16S | Uncultured Epsilonproteobacteria affiliated to Nautiliaceae | ✘ | ✘ |
| Spec | Epsi1 | — | 16S | Uncultured Epsilonproteobacteria affiliated to Sulfirimonas/Thiomicrospira | ✘ | ✘ |
| Spec | Epsi3 | — | 16S | Uncultured Epsilonproteobacteria affiliated to Sulfirimonas/Thiomicrospira | ✘ | ✘ |
| Spec | Alvi2 | — | 16S | Unidentified Epsilonproteobacteria affiliated to Alvinella | ✘ | ✘ |
| Spec | Alvi3 | — | 16S | Unidentified Epsilonproteobacteria affiliated to Alvinella | ✘ | ✘ |
| Spec | Alvi4 | — | 16S | Unidentified Epsilonproteobacteria affiliated to Alvinella | ✘ | ✘ |
| Spec | Alvi5 | — | 16S | Unidentified Epsilonproteobacteria affiliated to Alvinella | ✘ | ✘ |
| Spec | Arco2 | — | 16S | Unidentified Epsilonproteobacteria affiliated to Arcobacter | ✘ | ✘ |
| Spec | Plancto13 | — | 16S | Uncultured anoxic bacteria affiliated to candidatus Kuenenia | ✘ | ✘ |
| Spec | Plancto14 | — | 16S | Uncultured anoxic bacteria affiliated to candidatus Kuenenia | ✘ | ✘ |
| Spec | Plancto15 | — | 16S | Uncultured anoxic bacteria affiliated to candidatus Kuenenia | ✘ | ✘ |