List of probes and primers

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Entered target organism: Bacteria.

463 probes found.

Hit type Probe name Full name (Alm et al.) Target rRNA Specificity FISH Primer
Spec Ubet-0990 S-*-Ubet-0990-a-A-21 16S some unclassified Betaproteobacteria ✔ ✘
Spec Thio-1032 S-*-Thio-1032-a-A-18 16S some Thiobacillus and some unclassified Betaproteobacteria ✔ ✘
Spec Eub927 S-D-Eub-0927-a-A-18 16S most Bacteria ✘ ✘
Spec Nsc825 S-*-Nsc-0825-a-A-18 16S betaproteobacterial AOB ✘ ✘
Spec HGC236 — 16S Actinobacteria ✘ ✘
Spec AcI-840-1 (AC840a) — 16S Subgroup of acI lineage (Actinobacteria) ✔ ✘
Spec AcI-840-2 (AC840b) — 16S Subgroup of acI lineage (Actinobacteria) ✔ ✘
Spec AcI-1214 — 16S acI lineage of limnic Actinobacteria ✔ ✘
Spec OcraDEL1 — 16S Deltaproteobacterial symbiont 1 of Olavius crassitunicatus ✔ ✘
Spec OcraDEL2 — 16S Deltaproteobacterial symbiont 2 of Olavius crassitunicatus ✔ ✘
Spec OcraDEL3 — 16S Deltaproteobacterial symbiont 3 of Olavius crassitunicatus ✔ ✘
Spec EPSY549 S-C-eProt-0549-a-A-18 16S Epsilonproteobacteria ✔ ✘
Spec EPSY914 S-C-eProt-0914-a-A-18 16S Epsilonproteobacteria ✘ ✘
Spec EPSY1384 S-C-eProt-1384-a-A-18 16S Epsilonproteobacteria ✘ ✘
Spec E11 — 16S Eubacteria ✔ ✘
Spec Nost993 S-*-Nost-993-a-A-18 16S Filamentous Alphaproteobacteria ✔ ✘
Spec PPx1002 S-*-PPx-1002-a-A-18 16S Filamentous Alphaproteobacteria ✔ ✘
Spec Psc-523 — 16S Piscichlamydia salmonis (and few other unrelated bacteria) ✘ ✘
Spec ACIDO228 — 16S Acidobacteria subdivision 1 ✔ ✘
Spec Beta1 — 16S Betaproteobacteria ✘ ✘
Spec Beta2 — 16S Betaproteobacteria ✘ ✘
Spec Beta3 — 16S Betaproteobacteria ✘ ✘
Spec Beta4 — 16S Betaproteobacteria ✘ ✘
Spec EUB342 — 16S Most Bacteria ✘ ✘
Spec SUL90 S-*-Sul-0090-a-A-18 16S Subgroup of Epsilonproteobacteria (Uncultured Helicobacteraceae, Clone GD17b, Clone GD17a) ✘ ✘