List of probes and primers

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Entered target organism: Vibrio.

78 probes found.

Hit type Probe name Full name (Alm et al.) Target rRNA Specificity FISH Primer
Exact VIB572a — 16S Genus Vibrio ✔ ✘
Exact KO 232 S-*-Vchol-0122-a-A-18 16S Vibrio cholerae, V. mimicus ✘ ✘
Exact G V — 16S Vibrio ✔ ✘
Spec DSBO224 — 16S Desulfobotulus sapovorans, Desulfovibrio fairfieldensis, and other Deltaproteobacteria ✔ ✘
Spec DSD131 (DSVAE131) S-S-Dsv.ae-0131-a-A-18 16S Desulfovibrio aestuarii ✔ ✘
Spec DSV1154 — 16S Desulfovibrio alcoholivorans, D. fructosivorans, D. burkinensis, rice field isolate F1-7b and R-SucA1 ✘ ✘
Spec DSV1292 S-*-Dsv-1292-a-A-18 16S Some Desulfovibrio and Bilophila wadsworthia ✔ ✘
Spec DSV407 — 16S Few Desulfovibrionaceae, Desulfohalobiaceae, and Desulfonatronumaceae ✔ ✘
Spec Dsv683 S-*-Dsv-0683-a-A-22 16S Desulfovibrionaceae, metal reducers ✘ ✘
Spec 687(DSV687) S-F-Dsv-0687-a-A-16 16S Most Desulfovibrionales (excluding Lawsonia) and many Desulfuromonales ✔ ✘
Spec DSV698 — 16S Some Desulfovibrio, Bilophila wadsworthia, and Lawsonia intracellularis ✔ ✘
Spec SRB385 (SRB) S-*-Srb-0385-a-A-18 16S Most Desulfovibrionales and other Bacteria ✔ ✘
Spec VaV3 — 16S Vibrio anguillarum ✘ ✘
Spec V3VV — 16S Vibrio vulnificus ✘ ✘
Spec NTSPA714 S-*-Ntspa-714-a-A-18 16S Phylum Nitrospira, not Thermodesulfovibrio islandicus ✘ ✘
Spec DSB623a S-*-Dsb-0623-a-A-18 16S Desulfobacter curvatus, Dsb. halotolerans, Dsb. hydrogenophilus, Dsb. postgatei, Dsb. Vibrioformis ✘ ✘
Spec DSV686 S-*-Dsv-0686-a-A-18 16S Most Desulfovibrionales and Desulfuromonadales ✘ ✘
Spec DSV698 S-*-Dsv-0698-a-A-18 16S Desulfovibrio caledoniensis, Dsv. dechloracetivorans, Dsv. profundus, Dsv. aespoeensis, Dsv. halophilus, Dsv. gracilis, Dsv. longus, Dsv. salexigens, Dsv. zosterae, Dsv. bastinii, Dsv. fairfieldensis, Dsv. intestinalis, Dsv. piger, Dsv. desulfuricans, Dsv ✘ ✘
Spec DVDAPC872 S-*-Dv.d.a.p.c-0872-a-A-18 16S Desulfovibrio caledoniensis, Dsv. dechloracetivorans, Dsv. profundus, Dsv.aespoeensis ✘ ✘
Spec DVHO130 S-*-Dv.h.o-0130-a-A-18 16S Desulfovibrio halophilus, Dsv. oxyclinae ✘ ✘
Spec DVHO733 S-*-Dv.h.o-0733-a-A-18 16S Desulfovibrio halophilus, Dsv. oxyclinae ✘ ✘
Spec DVHO831 S-*-Dv.h.o-0831-a-A-18 16S Desulfovibrio halophilus, Dsv. oxyclinae ✘ ✘
Spec DVHO1424 S-*-Dv.h.o-1424-a-A-18 16S Desulfovibrio halophilus, Dsv. oxyclinae ✘ ✘
Spec DVAA1111 S-*-Dv.a.a-1111-a-A-18 16S Desulfovibrio africanus, Dsv. aminophilus ✘ ✘
Spec DVGL199 S-*-Dv.g.l-0199-a-A-18 16S Desulfovibrio gracilis, Dsv. longus ✘ ✘