List of probes and primers

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Entered target organism: Bacteroides.

39 probes found.

Hit type Probe name Full name (Alm et al.) Target rRNA Specificity FISH Primer
Exact Bacte7 — 16S Bacteroides ✘ ✘
Exact Bot — 16S B. ovatus and B. thetaiotaomicron ✔ ✘
Exact BCE182 — 16S Group 5 clones (AC065 and MC049), closely related to Bacteroides cellulosolvens ✔ ✘
Spec BACSUCC — 16S Fibrobacter succinogenes (Bacteroides succinogenes) NR9 and DR7 ✘ ✘
Spec ssp. succinogenes — 16S Fibrobacter succinogenes subsp. succinogenes (Bacteroides succinogenes S85 and A3c) ✘ ✘
Spec BT-1 — 16S Bacteroides thetaiotaomicron ATCC 29148 GenBank no. (GI) 13537351 ✘ ✘
Spec BT-2 — 16S Bacteroides thetaiotaomicron ATCC 29148 GenBank no. (GI) 13537351 ✘ ✘
Spec BT-3 — 16S Bacteroides thetaiotaomicron ATCC 29148 GenBank no. (GI) 13537351 ✘ ✘
Spec BV-1 — 16S Bacteroides vulgatus ATCC 8482 GenBank no. (GI) 173916 ✘ ✘
Spec BV-2 — 16S Bacteroides vulgatus ATCC 8482 GenBank no. (GI) 173916 ✘ ✘
Spec BV-3 — 16S Bacteroides vulgatus ATCC 8482 GenBank no. (GI) 173916 ✘ ✘
Spec BF-1 — 16S Bacteroides fragilis ATCC 23745 GenBank no. (GI) 143964 ✘ ✘
Spec BF-2 — 16S Bacteroides fragilis ATCC 23745 GenBank no. (GI) 143964 ✘ ✘
Spec BF-3 — 16S Bacteroides fragilis ATCC 23745 GenBank no. (GI) 143964 ✘ ✘
Spec BD-1 — 16S Bacteroides distasonis ATCC 8503 GenBank no. (GI) 173915 ✘ ✘
Spec BD-2 — 16S Bacteroides distasonis ATCC 8503 GenBank no. (GI) 173915 ✘ ✘
Spec BD-3 — 16S Bacteroides distasonis ATCC 8503 GenBank no. (GI) 173915 ✘ ✘
Spec B(T)AFO — 16S Tannerella forsythensis (Bacteroides forsythus) ✔ ✘
Spec Bfra602 S-*-Bfra-0602-a-A-19 16S Bacteroides fragilis group ✔ ✘
Spec Bdis656 S-*-Bdis-0656-a-A-18 16S Bacteroides distasonis ✔ ✘
Spec CFB935 — 16S Bacteroides-Porphyromonas-Prevotella subgroup ✘ ✘
Spec Chlp441 S-S-Chlphb-0441-a-A-23 16S Chlorobium phaeobacteroides (DSM 266), strain 1VIID7 and clone 366 Lake Cadagno. ✔ ✘
Spec BCE182 — 16S Group 5 clones (AC065 and MC049), closely related to Bacteroides cellulosolvens ✔ ✘
Spec Bacte7 — 16S Bacteroides ✘ ✘
Spec S-*-CFB-0655-a-A-18 S-*-CFB-0655-a-A-18 16S OTU 8 of CFB (Cytophaga-Flavobacterium-Bacteroides) ✔ ✘