Details of the microarray

Array name Description Technique Reference
Nitrifier-Microarray Gel-based oligonucleotide microarray (microchip) for detection of nitrifying bacteria. The microarray contains 26 16S rRNA-targeted oligonucleotide probes at varying levels of specificity. Oligonucleotide probes were immobilized through reductive coupling of the 3? amino group of the oligonucleotide with the aldehyde group of the activated gel pad on the microarrays Impact of prehybridization PCR amplification on microarray detection of nitrifying bacteria in wastewater treatment plant samples. Siripong S, Kelly JJ, Stahl DA, Rittmann BE. Environmental microbiology. 2006. Pubmed: 16913917

The following probes are part of the array:

EUB338 (Bact338) (bacterial) (pB-159), NB1000 (pB-237), NIT3 (pB-241), Nse1472 (pB-246), Nsm156 (pB-247), Nso1225 (pB-248), Nso190 (pB-249), Nsv443 (pB-250), Ntspa662 (pB-253), Ntspa712 (pB-254), UNIV1390 (pB-327), NEU (pB-382), NSR826 (pB-625), NSR1156 (pB-626), Nmo218 (pB-957), Univ907 (pB-1235), Eub927 (pB-1236), NmII (pB-1237), NmIII (pB-1238), NmIV (pB-1239), Nsr1145 (pB-1240), Nsc825 (pB-1241), Nsr989 (pB-1242), Nsn227 (pB-1243), Ncc214 (pB-1244)