Probe details

Mcyst-1261

Tested for in situ hybridization.

Accession no. pB-930
Full name (Alm et al.) -
Categories methylotrophic bacteria
Specificity peat-inhabiting subgroup of Methylocystis spp.
Taxonomy Methylocystis; Methylocystaceae; Hyphomicrobiales; Alphaproteobacteria; Pseudomonadota; Pseudomonadati; Bacteria; cellular organisms
Sequence 5'-TTG CTC GAG GTC GCC CTT-3'
Length [nt] 18
G+C content [%] 61
Target rRNA 16S
Position 1261-1278
Formamide -
Check specificity/coverage SILVA TestProbe
References Differential detection of type II methanotrophic bacteria in acidic peatlands using newly developed 16S rRNA-targeted fluorescent oligonucleotide probes. Dedysh SN, Dunfield PF, Derakshani M, Stubner S, Heyer J, Liesack W. FEMS microbiology ecology. 2003. Pubmed: 19719661
Remarks -