Probe details

Rint1102

Accession no. pB-724
Full name (Alm et al.) S-S-Rint-1102-a-A-18
Categories animal and human associated microbiota
intestinal microbiota
Specificity Roseburia intestinalis, human gut isolates L1-952, L1-93, L1-8151, L1-810, and L1-82
Taxonomy Roseburia intestinalis; Roseburia; Lachnospiraceae; Lachnospirales; Clostridia; Bacillota; Bacillati; Bacteria; cellular organisms
Sequence 5'-GCT TAC CCG CTG GCT ACT-3'
Length [nt] 18
G+C content [%] 61
Target rRNA 16S
Position 1102-1119
Formamide -
Check specificity/coverage SILVA TestProbe
References Oligonucleotide probes that detect quantitatively significant groups of butyrate-producing bacteria in human feces. Hold GL, Schwiertz A, Aminov RI, Blaut M, Flint HJ. Applied and environmental microbiology. 2003. Pubmed: 12839823
Remarks No formamide used hybridization temperature: 46° C.