Probe details

EAE-1

Accession no. pB-706
Full name (Alm et al.) -
Categories
Specificity Eubacterium aerofaciens ATCC 25986 GenBank no. (GI) 5030911
Taxonomy Collinsella aerofaciens; Collinsella; Coriobacteriaceae; Coriobacteriales; Coriobacteriia; Actinomycetota; Bacillati; Bacteria; cellular organisms
Sequence 5'-GCC CGA AAG GAC GGG TAA TAC CGG ATA CCC CGG GGT GC-3'
Length [nt] 38
G+C content [%] 66
Target rRNA 16S
Position 1-37
Formamide -
Check specificity/coverage SILVA TestProbe
References Design and evaluation of oligonucleotide-microarray method for the detection of human intestinal bacteria in fecal samples. Wang RF, Beggs ML, Robertson LH, Cerniglia CE. FEMS microbiology letters. 2002. Pubmed: 12167534
Remarks See Table 1 in reference for orientation (5apos to 3apos or 3apos to 5apos) of the probe sequence