Probe details

CC-1

Accession no. pB-670
Full name (Alm et al.) -
Categories
Specificity Clostridium clostridiiforme ATCC 29084 GenBank no. (GI) 174147
Taxonomy Enterocloster clostridioformis; Enterocloster; Lachnospiraceae; Lachnospirales; Clostridia; Bacillota; Bacillati; Bacteria; cellular organisms
Sequence 5'-AGT GCC GCA TGG CAG TGT GTG AAA AAC TCC GGT AGT GTG A-3'
Length [nt] 40
G+C content [%] 52
Target rRNA 16S
Position 1-39
Formamide -
Check specificity/coverage SILVA TestProbe
References Design and evaluation of oligonucleotide-microarray method for the detection of human intestinal bacteria in fecal samples. Wang RF, Beggs ML, Robertson LH, Cerniglia CE. FEMS microbiology letters. 2002. Pubmed: 12167534
Remarks See Table 1 in reference for orientation (5apos to 3apos or 3apos to 5apos) of the probe sequence