Probe details

BF-1

Accession no. pB-664
Full name (Alm et al.) -
Categories
Specificity Bacteroides fragilis ATCC 23745 GenBank no. (GI) 143964
Taxonomy Bacteroides fragilis; Bacteroides; Bacteroidaceae; Bacteroidales; Bacteroidia; Bacteroidota; Bacteroidota/Chlorobiota group; FCB group; Pseudomonadati; Bacteria; cellular organisms
Sequence 5'-CCG ATA GCA TAA TGA TTC CGC ATG GTT TCA TTA TTA AAG G-3'
Length [nt] 40
G+C content [%] 38
Target rRNA 16S
Position 1-39
Formamide -
Check specificity/coverage SILVA TestProbe
References Design and evaluation of oligonucleotide-microarray method for the detection of human intestinal bacteria in fecal samples. Wang RF, Beggs ML, Robertson LH, Cerniglia CE. FEMS microbiology letters. 2002. Pubmed: 12167534
Remarks See Table 1 in reference for orientation (5apos to 3apos or 3apos to 5apos) of the probe sequence