Probe details

BT-3

Accession no. pB-660
Full name (Alm et al.) -
Categories
Specificity Bacteroides thetaiotaomicron ATCC 29148 GenBank no. (GI) 13537351
Taxonomy Bacteroides thetaiotaomicron; Bacteroides; Bacteroidaceae; Bacteroidales; Bacteroidia; Bacteroidota; Bacteroidota/Chlorobiota group; FCB group; Pseudomonadati; Bacteria; cellular organisms
Sequence 5'-CAT TTG AAT ATA TTG GAA ACA GTA TAG CCG CAA GGC AAA TG-3'
Length [nt] 41
G+C content [%] 37
Target rRNA 16S
Position 1-40
Formamide -
Check specificity/coverage SILVA TestProbe
References Design and evaluation of oligonucleotide-microarray method for the detection of human intestinal bacteria in fecal samples. Wang RF, Beggs ML, Robertson LH, Cerniglia CE. FEMS microbiology letters. 2002. Pubmed: 12167534
Remarks See Table 1 in reference for orientation (5apos to 3apos or 3apos to 5apos) of the probe sequence