Probe details

NSR447

Tested for in situ hybridization.

Accession no. pB-627
Full name (Alm et al.) -
Categories bacteria of relevance in wastewater treatment
nitrite-oxidizing bacteria
Specificity Nitrospira spp.
Taxonomy Nitrospira; Nitrospiraceae; Nitrospirales; Nitrospiria; Nitrospirota; Pseudomonadati; Bacteria; cellular organisms
Sequence 5'-GGT TTC CCG TTC CAT CTT-3'
Length [nt] 18
G+C content [%] 50
Target rRNA 16S
Position 447-464
Formamide 30
Check specificity/coverage SILVA TestProbe
References Identification and activities in situ of Nitrosospira and Nitrospira spp. as dominant populations in a nitrifying fluidized bed reactor. Schramm A, De Beer D, Wagner M, Amann R. Applied and environmental microbiology. 1998. Pubmed: 9726900
Remarks Specific for clone o9, g6, o14, see reference