Probe details
PAO846
Tested for in situ hybridization.
|
| Accession no. |
pB-623 |
| Full name (Alm et al.) |
S-S-Rhodo-0846-a-A-18 |
| Categories |
bacteria of relevance in wastewater treatment
|
| Specificity |
Candidatus Accumulibacter phosphatis |
| Taxonomy |
Candidatus Accumulibacter phosphatis;
Candidatus Accumulibacter;
Betaproteobacteria incertae sedis;
Betaproteobacteria;
Pseudomonadota;
Pseudomonadati;
Bacteria;
cellular organisms
|
| Sequence |
5'-GTT AGC TAC GGC ACT AAA AGG-3' |
| Length [nt] |
21 |
| G+C content [%] |
48 |
| Target rRNA |
16S |
| Position |
846-866 |
| Formamide |
35 |
| Check specificity/coverage |
SILVA TestProbe
|
| References |
Identification of polyphosphate-accumulating organisms and design of 16S rRNA-directed probes for their detection and quantitation. Crocetti GR, Hugenholtz P, Bond PL, Schuler A, Keller J, Jenkins D, Blackall LL. Applied and environmental microbiology. 2000. Pubmed: 10698788
In situ identification of polyphosphate- and polyhydroxyalkanoate-accumulating traits for microbial populations in a biological phosphorus removal process. Liu WT, Nielsen AT, Wu JH, Tsai CS, Matsuo Y, Molin S. Environmental microbiology. 2001. Pubmed: 11321541
|
| Remarks |
- |