Probe details

DFMI227a

Accession no. pB-511
Full name (Alm et al.) S-*-DfmI-0227-a-A-18
Categories sulfate-reducing microbes
Specificity Desulfotomaculum putei, Dfm. gibsoniae, Dfm. geothermicum, Dfm. thermosapovorans, Dfm. thermoacidovorans, Dfm. thermobenzoicum, Dfm. thermoacetoxidans, Dfm. australicum, Dfm. kuznetsovii, Dfm. thermocisternum, Dfm. luciae, Sporotomaculum hydroxybenzoicum
Taxonomy Desulfotomaculum; Desulfotomaculaceae; Eubacteriales; Clostridia; Bacillota; Bacillati; Bacteria; cellular organisms
Sequence 5'-ATG GGA CGC GGA CCC ATC-3'
Length [nt] 18
G+C content [%] 67
Target rRNA 16S
Position 227-244
Formamide -
Check specificity/coverage SILVA TestProbe
References Oligonucleotide microarray for 16S rRNA gene-based detection of all recognized lineages of sulfate-reducing prokaryotes in the environment. Loy A, Lehner A, Lee N, Adamczyk J, Meier H, Ernst J, Schleifer KH, Wagner M. Applied and environmental microbiology. 2002. Pubmed: 12324358
Remarks Use probes DFMI227a and DFMI227b in equimolar mixture to detect all Desulfotomaculum spp. of cluster I