Probe details

DSM213

Tested for in situ hybridization.

Accession no. pB-507
Full name (Alm et al.) S-G-Dsm-0213-a-A-18
Categories sulfate-reducing microbes
Specificity Desulfomicrobium
Taxonomy Desulfomicrobium; Desulfomicrobiaceae; Desulfovibrionales; Desulfovibrionia; Thermodesulfobacteriota; Pseudomonadati; Bacteria; cellular organisms
Sequence 5'-CAT CCT CGG ACG AAT GCA-3'
Length [nt] 18
G+C content [%] 56
Target rRNA 16S
Position 213-230
Formamide 15
Check specificity/coverage SILVA TestProbe
References Oligonucleotide microarray for 16S rRNA gene-based detection of all recognized lineages of sulfate-reducing prokaryotes in the environment. Loy A, Lehner A, Lee N, Adamczyk J, Meier H, Ernst J, Schleifer KH, Wagner M. Applied and environmental microbiology. 2002. Pubmed: 12324358
Improved 16S rRNA-targeted probe set for analysis of sulfate-reducing bacteria by fluorescence in situ hybridization. Lücker S, Steger D, Kjeldsen KU, MacGregor BJ, Wagner M, Loy A. Journal of microbiological methods. 2007. Pubmed: 17408790
Remarks -