Probe details

CPla-1

Tested for in situ hybridization.

Accession no. pB-3963
Full name (Alm et al.) -
Categories animal and human associated microbiota
intestinal microbiota
Specificity „Termite planctomycete cluster 1“
Taxonomy Planctomycetota; PVC group; Pseudomonadati; Bacteria; cellular organisms
Sequence 5'-TGC TTG TTT CAC CCT TGC G-3'
Length [nt] 19
G+C content [%] 53
Target rRNA 16S
Position 1029-1047
Formamide 20
Check specificity/coverage SILVA TestProbe
References Novel lineages of Planctomycetes densely colonize the alkaline gut of soil-feeding termites (Cubitermes spp.). Köhler T, Stingl U, Meuser K, Brune A. Environmental microbiology. 2008. Pubmed: 18279348
Remarks -