Probe details

Ntlc439

Tested for in situ hybridization.

Accession no. pB-3958
Full name (Alm et al.) S-G-Ntlc-439-a-A-18
Categories nitrite-oxidizing bacteria
Specificity Nitrolancetus hollandicus
Taxonomy Nitrolancea hollandica; Nitrolancea; Sphaerobacteraceae; Sphaerobacterineae; Sphaerobacterales; Thermomicrobia; Thermomicrobiota; Pseudomonadati; Bacteria; cellular organisms
Sequence 5'-TTG CTT CGT CCC CCA CAA-3'
Length [nt] 18
G+C content [%] 56
Target rRNA 16S
Position 439-461
Formamide 40
Check specificity/coverage SILVA TestProbe
References Nitrification expanded: discovery, physiology and genomics of a nitrite-oxidizing bacterium from the phylum Chloroflexi. Sorokin DY, Lücker S, Vejmelkova D, Kostrikina NA, Kleerebezem R, Rijpstra WI, Damsté JS, Le Paslier D, Muyzer G, Wagner M, van Loosdrecht MC, Daims H. The ISME journal. 2012. Pubmed: 22763649
Remarks -